Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
O00370 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
O00370 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
O00370 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
O00370 AL359736.2-201ENST00000621992 437 ntBASIC20.76■□□□□ 0.91
O00370 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.76■□□□□ 0.91
O00370 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.76■□□□□ 0.91
O00370 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
O00370 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
O00370 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.76■□□□□ 0.91
O00370 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
O00370 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
O00370 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
O00370 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
O00370 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
O00370 AC018445.3-201ENST00000624177 1945 ntBASIC20.75■□□□□ 0.91
O00370 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
O00370 GCSHP5-201ENST00000443090 522 ntBASIC20.75■□□□□ 0.91
O00370 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
O00370 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.75■□□□□ 0.91
O00370 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
O00370 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.75■□□□□ 0.91
O00370 AC110285.5-201ENST00000611501 352 ntBASIC20.75■□□□□ 0.91
O00370 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.75■□□□□ 0.91
O00370 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.75■□□□□ 0.91
O00370 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
O00370 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
O00370 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
O00370 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.75■□□□□ 0.91
O00370 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
O00370 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
O00370 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
O00370 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
O00370 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.74■□□□□ 0.91
O00370 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
O00370 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.74■□□□□ 0.91
O00370 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
O00370 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
O00370 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
O00370 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
O00370 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.74■□□□□ 0.91
O00370 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
O00370 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
O00370 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
O00370 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.74■□□□□ 0.91
O00370 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.74■□□□□ 0.91
O00370 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
O00370 TMEM191A-211ENST00000637163 1067 ntBASIC20.74■□□□□ 0.91
O00370 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
O00370 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
O00370 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
O00370 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
O00370 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
O00370 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
O00370 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
O00370 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.73■□□□□ 0.91
O00370 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.73■□□□□ 0.91
O00370 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
O00370 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
O00370 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.73■□□□□ 0.91
O00370 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
O00370 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
O00370 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.73■□□□□ 0.91
O00370 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.73■□□□□ 0.91
O00370 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
O00370 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.73■□□□□ 0.91
O00370 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
O00370 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.73■□□□□ 0.91
O00370 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
O00370 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
O00370 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
O00370 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.73■□□□□ 0.91
O00370 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
O00370 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.73■□□□□ 0.91
O00370 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
O00370 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
O00370 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
O00370 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
O00370 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.72■□□□□ 0.91
O00370 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
O00370 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.72■□□□□ 0.91
O00370 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.72■□□□□ 0.91
O00370 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
O00370 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
O00370 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
O00370 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.72■□□□□ 0.91
O00370 TUBB8P6-201ENST00000436895 1288 ntBASIC20.72■□□□□ 0.91
O00370 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.72■□□□□ 0.91
O00370 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.72■□□□□ 0.91
O00370 AC004264.1-201ENST00000608354 794 ntBASIC20.72■□□□□ 0.91
O00370 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
O00370 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
O00370 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
O00370 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
O00370 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
O00370 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.72■□□□□ 0.91
O00370 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
O00370 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
O00370 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
O00370 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms