Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TMX2-CTNND1H3BSU7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 KSR1P1-201ENST00000446298 240 ntBASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 AC121338.2-201ENST00000622535 1744 ntBASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.11■□□□□ 0.65
TMX2-CTNND1H3BSU7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 AC124283.5-201ENST00000624661 1809 ntBASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 TMPOP1-202ENST00000424642 1267 ntBASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 AC145285.6-201ENST00000604632 637 ntBASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMX2-CTNND1H3BSU7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMX2-CTNND1H3BSU7 AL049796.1-201ENST00000565336 1766 ntBASIC19.09■□□□□ 0.65
TMX2-CTNND1H3BSU7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMX2-CTNND1H3BSU7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMX2-CTNND1H3BSU7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TMX2-CTNND1H3BSU7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMX2-CTNND1H3BSU7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.09■□□□□ 0.65
TMX2-CTNND1H3BSU7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.09■□□□□ 0.65
TMX2-CTNND1H3BSU7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TMX2-CTNND1H3BSU7 RBM17P1-201ENST00000453646 1190 ntBASIC19.09■□□□□ 0.65
TMX2-CTNND1H3BSU7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.09■□□□□ 0.65
TMX2-CTNND1H3BSU7 AL031963.3-201ENST00000606441 850 ntBASIC19.09■□□□□ 0.65
TMX2-CTNND1H3BSU7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.09■□□□□ 0.65
TMX2-CTNND1H3BSU7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMX2-CTNND1H3BSU7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMX2-CTNND1H3BSU7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMX2-CTNND1H3BSU7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TMX2-CTNND1H3BSU7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
TMX2-CTNND1H3BSU7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.09■□□□□ 0.65
TMX2-CTNND1H3BSU7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
TMX2-CTNND1H3BSU7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMX2-CTNND1H3BSU7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TMX2-CTNND1H3BSU7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TMX2-CTNND1H3BSU7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
TMX2-CTNND1H3BSU7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TMX2-CTNND1H3BSU7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.65
TMX2-CTNND1H3BSU7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TMX2-CTNND1H3BSU7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMX2-CTNND1H3BSU7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMX2-CTNND1H3BSU7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.08■□□□□ 0.64
TMX2-CTNND1H3BSU7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.08■□□□□ 0.64
TMX2-CTNND1H3BSU7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.08■□□□□ 0.64
TMX2-CTNND1H3BSU7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMX2-CTNND1H3BSU7 AC005363.2-201ENST00000618631 242 ntBASIC19.08■□□□□ 0.64
TMX2-CTNND1H3BSU7 AC092865.7-201ENST00000641832 219 ntBASIC19.08■□□□□ 0.64
TMX2-CTNND1H3BSU7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMX2-CTNND1H3BSU7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMX2-CTNND1H3BSU7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMX2-CTNND1H3BSU7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
TMX2-CTNND1H3BSU7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMX2-CTNND1H3BSU7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.64
TMX2-CTNND1H3BSU7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMX2-CTNND1H3BSU7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.08■□□□□ 0.64
TMX2-CTNND1H3BSU7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMX2-CTNND1H3BSU7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms