Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM235A6NFC5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM235A6NFC5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM235A6NFC5 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM235A6NFC5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.62■□□□□ 0.25
TMEM235A6NFC5 AC010536.3-201ENST00000620306 533 ntBASIC16.62■□□□□ 0.25
TMEM235A6NFC5 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.62■□□□□ 0.25
TMEM235A6NFC5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM235A6NFC5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM235A6NFC5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM235A6NFC5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM235A6NFC5 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM235A6NFC5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 MCRIP2P1-201ENST00000394346 511 ntBASIC16.61■□□□□ 0.25
TMEM235A6NFC5 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 AL162412.1-201ENST00000567129 965 ntBASIC16.61■□□□□ 0.25
TMEM235A6NFC5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 AC005837.3-201ENST00000612163 286 ntBASIC16.61■□□□□ 0.25
TMEM235A6NFC5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM235A6NFC5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 AC105020.6-201ENST00000621523 1217 ntBASIC16.6■□□□□ 0.25
TMEM235A6NFC5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM235A6NFC5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 AC005332.8-201ENST00000622750 2735 ntBASIC16.59■□□□□ 0.25
TMEM235A6NFC5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 MFSD11-216ENST00000590393 1141 ntBASIC16.59■□□□□ 0.25
TMEM235A6NFC5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 TEX21P-204ENST00000641479 1693 ntBASIC16.59■□□□□ 0.25
TMEM235A6NFC5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEM235A6NFC5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TMEM235A6NFC5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TMEM235A6NFC5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
TMEM235A6NFC5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TMEM235A6NFC5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TMEM235A6NFC5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
TMEM235A6NFC5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms