Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TCRBV5S1A1TA0A578 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TCRBV5S1A1TA0A578 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.35■□□□□ 0.85
TCRBV5S1A1TA0A578 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
TCRBV5S1A1TA0A578 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 AP000974.1-201ENST00000623909 2387 ntBASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 AC124016.1-201ENST00000609552 612 ntBASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV5S1A1TA0A578 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
TCRBV5S1A1TA0A578 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TCRBV5S1A1TA0A578 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.33■□□□□ 0.85
TCRBV5S1A1TA0A578 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.33■□□□□ 0.85
TCRBV5S1A1TA0A578 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.33■□□□□ 0.85
TCRBV5S1A1TA0A578 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TCRBV5S1A1TA0A578 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TCRBV5S1A1TA0A578 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.33■□□□□ 0.85
TCRBV5S1A1TA0A578 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.33■□□□□ 0.85
TCRBV5S1A1TA0A578 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.33■□□□□ 0.85
TCRBV5S1A1TA0A578 HLA-A-209ENST00000638375 975 ntBASIC20.33■□□□□ 0.85
TCRBV5S1A1TA0A578 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TCRBV5S1A1TA0A578 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TCRBV5S1A1TA0A578 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
TCRBV5S1A1TA0A578 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TCRBV5S1A1TA0A578 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.33■□□□□ 0.84
TCRBV5S1A1TA0A578 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TCRBV5S1A1TA0A578 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TCRBV5S1A1TA0A578 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TCRBV5S1A1TA0A578 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TCRBV5S1A1TA0A578 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TCRBV5S1A1TA0A578 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBV5S1A1TA0A578 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBV5S1A1TA0A578 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBV5S1A1TA0A578 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.32■□□□□ 0.84
TCRBV5S1A1TA0A578 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBV5S1A1TA0A578 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBV5S1A1TA0A578 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBV5S1A1TA0A578 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBV5S1A1TA0A578 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.32■□□□□ 0.84
TCRBV5S1A1TA0A578 POU5F1P3-201ENST00000428824 1078 ntBASIC20.32■□□□□ 0.84
TCRBV5S1A1TA0A578 AC128676.1-201ENST00000454392 318 ntBASIC20.32■□□□□ 0.84
TCRBV5S1A1TA0A578 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.32■□□□□ 0.84
TCRBV5S1A1TA0A578 AC006058.3-201ENST00000606217 1069 ntBASIC20.32■□□□□ 0.84
TCRBV5S1A1TA0A578 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.32■□□□□ 0.84
TCRBV5S1A1TA0A578 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBV5S1A1TA0A578 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.32■□□□□ 0.84
TCRBV5S1A1TA0A578 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBV5S1A1TA0A578 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TCRBV5S1A1TA0A578 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 KRASP1-201ENST00000407852 552 ntBASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms