Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV7S3A2A0A539 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV7S3A2A0A539 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV7S3A2A0A539 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV7S3A2A0A539 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV7S3A2A0A539 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV7S3A2A0A539 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV7S3A2A0A539 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV7S3A2A0A539 AC141586.3-201ENST00000562166 1838 ntBASIC19.79■□□□□ 0.76
TCRBV7S3A2A0A539 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV7S3A2A0A539 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.79■□□□□ 0.76
TCRBV7S3A2A0A539 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV7S3A2A0A539 CROCCP3-202ENST00000420820 1947 ntBASIC19.79■□□□□ 0.76
TCRBV7S3A2A0A539 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.79■□□□□ 0.76
TCRBV7S3A2A0A539 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TCRBV7S3A2A0A539 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.79■□□□□ 0.76
TCRBV7S3A2A0A539 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.79■□□□□ 0.76
TCRBV7S3A2A0A539 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.79■□□□□ 0.76
TCRBV7S3A2A0A539 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.79■□□□□ 0.76
TCRBV7S3A2A0A539 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.79■□□□□ 0.76
TCRBV7S3A2A0A539 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TCRBV7S3A2A0A539 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TCRBV7S3A2A0A539 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 SDHAP1-207ENST00000440850 2000 ntBASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 SLC29A4P1-201ENST00000398760 971 ntBASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 AL138781.1-201ENST00000566567 1274 ntBASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 AC092368.3-202ENST00000574180 1591 ntBASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.78■□□□□ 0.76
TCRBV7S3A2A0A539 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV7S3A2A0A539 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV7S3A2A0A539 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV7S3A2A0A539 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.77■□□□□ 0.76
TCRBV7S3A2A0A539 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV7S3A2A0A539 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV7S3A2A0A539 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TCRBV7S3A2A0A539 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV7S3A2A0A539 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV7S3A2A0A539 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV7S3A2A0A539 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV7S3A2A0A539 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV7S3A2A0A539 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV7S3A2A0A539 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV7S3A2A0A539 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.77■□□□□ 0.76
TCRBV7S3A2A0A539 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.77■□□□□ 0.76
TCRBV7S3A2A0A539 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.77■□□□□ 0.76
TCRBV7S3A2A0A539 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV7S3A2A0A539 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV7S3A2A0A539 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV7S3A2A0A539 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TCRBV7S3A2A0A539 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TCRBV7S3A2A0A539 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 AC104417.2-201ENST00000562989 1793 ntBASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 AC083880.1-201ENST00000608266 535 ntBASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
TCRBV7S3A2A0A539 AC006333.2-201ENST00000607957 2099 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms