Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV13-2A0A0B4J235 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAV13-2A0A0B4J235 NOC2LP1-202ENST00000452600 2235 ntBASIC12.86□□□□□ -0.35
TRAV13-2A0A0B4J235 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV13-2A0A0B4J235 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV13-2A0A0B4J235 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TRAV13-2A0A0B4J235 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV13-2A0A0B4J235 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV13-2A0A0B4J235 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TRAV13-2A0A0B4J235 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV13-2A0A0B4J235 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV13-2A0A0B4J235 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
TRAV13-2A0A0B4J235 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV13-2A0A0B4J235 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TRAV13-2A0A0B4J235 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV13-2A0A0B4J235 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV13-2A0A0B4J235 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV13-2A0A0B4J235 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV13-2A0A0B4J235 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC12.86□□□□□ -0.35
TRAV13-2A0A0B4J235 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TRAV13-2A0A0B4J235 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 AL133373.2-201ENST00000623187 2828 ntBASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 PTPA-214ENST00000423100 988 ntTSL 2 BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 FAM21FP-204ENST00000608637 956 ntBASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 AP001271.2-201ENST00000624018 1556 ntBASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 BICD1-207ENST00000551848 1962 ntBASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 WIZP1-201ENST00000531444 2299 ntBASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV13-2A0A0B4J235 USP49-202ENST00000373010 2446 ntTSL 5 BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 AC006333.2-201ENST00000607957 2099 ntBASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 AL356740.2-201ENST00000601559 647 ntBASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 AL354751.1-201ENST00000412768 1863 ntBASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 Z98044.1-201ENST00000632503 1764 ntBASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms