Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.43□□□□□ -1.7
COL21A1Q96P44 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL21A1Q96P44 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
COL21A1Q96P44 Y_RNA.62-201ENST00000362840 99 ntBASIC4.43□□□□□ -1.7
COL21A1Q96P44 RNU6-1331P-201ENST00000363658 106 ntBASIC4.43□□□□□ -1.7
COL21A1Q96P44 U3.30-201ENST00000391308 210 ntBASIC4.43□□□□□ -1.7
COL21A1Q96P44 AL133270.1-201ENST00000402635 279 ntBASIC4.43□□□□□ -1.7
COL21A1Q96P44 RNA5SP113-201ENST00000410486 84 ntBASIC4.43□□□□□ -1.7
COL21A1Q96P44 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL21A1Q96P44 AC004690.1-201ENST00000418216 328 ntBASIC4.43□□□□□ -1.7
COL21A1Q96P44 LINC00993-201ENST00000420453 540 ntBASIC4.43□□□□□ -1.7
COL21A1Q96P44 SETP10-201ENST00000424368 814 ntBASIC4.43□□□□□ -1.7
COL21A1Q96P44 AC092017.2-201ENST00000427600 362 ntBASIC4.43□□□□□ -1.7
COL21A1Q96P44 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.43□□□□□ -1.7
COL21A1Q96P44 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.43□□□□□ -1.7
COL21A1Q96P44 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.43□□□□□ -1.7
COL21A1Q96P44 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.43□□□□□ -1.7
COL21A1Q96P44 RN7SL41P-201ENST00000476144 297 ntBASIC4.43□□□□□ -1.7
COL21A1Q96P44 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.43□□□□□ -1.7
COL21A1Q96P44 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.43□□□□□ -1.7
COL21A1Q96P44 AL358913.1-201ENST00000554342 121 ntBASIC4.43□□□□□ -1.7
COL21A1Q96P44 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.43□□□□□ -1.7
COL21A1Q96P44 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.43□□□□□ -1.7
COL21A1Q96P44 AL049539.1-201ENST00000611964 459 ntBASIC4.43□□□□□ -1.7
COL21A1Q96P44 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL21A1Q96P44 AC079298.2-201ENST00000623885 459 ntBASIC4.43□□□□□ -1.7
COL21A1Q96P44 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.43□□□□□ -1.7
COL21A1Q96P44 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.43□□□□□ -1.7
COL21A1Q96P44 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.43□□□□□ -1.7
COL21A1Q96P44 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL21A1Q96P44 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
COL21A1Q96P44 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.43□□□□□ -1.7
COL21A1Q96P44 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
COL21A1Q96P44 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL21A1Q96P44 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.42□□□□□ -1.7
COL21A1Q96P44 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL21A1Q96P44 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.42□□□□□ -1.7
COL21A1Q96P44 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
COL21A1Q96P44 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.42□□□□□ -1.7
COL21A1Q96P44 AL139039.2-201ENST00000407436 479 ntBASIC4.42□□□□□ -1.7
COL21A1Q96P44 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.42□□□□□ -1.7
COL21A1Q96P44 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.42□□□□□ -1.7
COL21A1Q96P44 PDSS1P1-201ENST00000422953 1114 ntBASIC4.42□□□□□ -1.7
COL21A1Q96P44 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.42□□□□□ -1.7
COL21A1Q96P44 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.42□□□□□ -1.7
COL21A1Q96P44 HMGB3P10-201ENST00000434734 572 ntBASIC4.42□□□□□ -1.7
COL21A1Q96P44 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.42□□□□□ -1.7
COL21A1Q96P44 ELOCP3-201ENST00000439303 348 ntBASIC4.42□□□□□ -1.7
COL21A1Q96P44 AL450263.2-201ENST00000439400 589 ntBASIC4.42□□□□□ -1.7
COL21A1Q96P44 AC104651.2-201ENST00000447549 528 ntBASIC4.42□□□□□ -1.7
COL21A1Q96P44 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.42□□□□□ -1.7
COL21A1Q96P44 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.42□□□□□ -1.7
COL21A1Q96P44 AC092324.1-201ENST00000468671 324 ntBASIC4.42□□□□□ -1.7
COL21A1Q96P44 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.42□□□□□ -1.7
COL21A1Q96P44 AC083982.1-201ENST00000485679 344 ntBASIC4.42□□□□□ -1.7
COL21A1Q96P44 RNU1-6P-201ENST00000516290 144 ntBASIC4.42□□□□□ -1.7
COL21A1Q96P44 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.42□□□□□ -1.7
COL21A1Q96P44 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL21A1Q96P44 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.42□□□□□ -1.7
COL21A1Q96P44 AP001804.2-201ENST00000533932 910 ntBASIC4.42□□□□□ -1.7
COL21A1Q96P44 CYCSP28-201ENST00000534284 321 ntBASIC4.42□□□□□ -1.7
COL21A1Q96P44 RN7SL802P-201ENST00000577858 299 ntBASIC4.42□□□□□ -1.7
COL21A1Q96P44 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.42□□□□□ -1.7
COL21A1Q96P44 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.42□□□□□ -1.7
COL21A1Q96P44 MIR4737-201ENST00000583979 81 ntBASIC4.42□□□□□ -1.7
COL21A1Q96P44 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
COL21A1Q96P44 AC130352.1-201ENST00000602979 661 ntBASIC4.42□□□□□ -1.7
COL21A1Q96P44 AL512782.1-201ENST00000603093 364 ntBASIC4.42□□□□□ -1.7
COL21A1Q96P44 AL133406.3-201ENST00000606817 541 ntBASIC4.42□□□□□ -1.7
COL21A1Q96P44 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
COL21A1Q96P44 AC132825.1-201ENST00000463573 2247 ntBASIC4.42□□□□□ -1.7
COL21A1Q96P44 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.42□□□□□ -1.7
COL21A1Q96P44 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.41□□□□□ -1.7
COL21A1Q96P44 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
COL21A1Q96P44 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL21A1Q96P44 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL21A1Q96P44 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
COL21A1Q96P44 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.41□□□□□ -1.7
COL21A1Q96P44 AC104118.1-201ENST00000607625 1589 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 RNA5SP191-201ENST00000362585 102 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.41□□□□□ -1.7
COL21A1Q96P44 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.41□□□□□ -1.7
COL21A1Q96P44 RPL7P57-201ENST00000423238 740 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 OR2B7P-201ENST00000429302 934 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 NRBF2P3-201ENST00000432731 865 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 AC008072.1-201ENST00000434254 824 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 AL772161.1-201ENST00000439130 476 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 MTCO3P17-201ENST00000443775 513 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 EIF2S2P5-201ENST00000457635 968 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 RPL7AP28-201ENST00000464513 571 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 AC231760.1-201ENST00000498002 260 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.41□□□□□ -1.7
COL21A1Q96P44 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.41□□□□□ -1.7
COL21A1Q96P44 AP001880.2-201ENST00000538233 448 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.41□□□□□ -1.7
COL21A1Q96P44 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.41□□□□□ -1.7
COL21A1Q96P44 AC084759.1-201ENST00000561168 290 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 AC115989.2-201ENST00000578640 563 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 MIR5699-201ENST00000578903 90 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms