RNA–Protein interactions for RNA: ENST00000419784.1

LINC01945-201, Transcript of long intergenic non-protein coding RNA 1945, humanhuman

TSL 2 BASIC

Gene LINC01945, Length 840 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01945-201ENST00000419784 AEBP2Q6ZN18 517 aaPredicted RBP31.56■■■□□ 2.64
LINC01945-201ENST00000419784 CHIC1Q5VXU3 224 aa29.78■■■□□ 2.36
LINC01945-201ENST00000419784 SENP3Q9H4L4 574 aaPredicted RBP27■■□□□ 1.91
LINC01945-201ENST00000419784 PHF23Q9BUL5 403 aaPredicted RBP26.59■■□□□ 1.85
LINC01945-201ENST00000419784 FOXD1Q16676 465 aa25.17■■□□□ 1.62
LINC01945-201ENST00000419784 PLPPR3Q6T4P5 718 aa23.83■■□□□ 1.41
LINC01945-201ENST00000419784 MSH5O43196 834 aa23.67■■□□□ 1.38
LINC01945-201ENST00000419784 PIAS4Q8N2W9 510 aaPredicted RBP23.49■■□□□ 1.35
LINC01945-201ENST00000419784 POTEDQ86YR6 584 aa23.43■■□□□ 1.34
LINC01945-201ENST00000419784 PPP6R1Q9UPN7 881 aa23.35■■□□□ 1.33
LINC01945-201ENST00000419784 ADRA2BP18089 450 aa23.27■■□□□ 1.32
LINC01945-201ENST00000419784 MAPK8IP2Q13387 824 aaPredicted RBP21.43■■□□□ 1.02
LINC01945-201ENST00000419784 DMRT2Q9Y5R5 561 aa21.37■■□□□ 1.01
LINC01945-201ENST00000419784 SCAF1Q9H7N4 1312 aaKnown RBP21.34■■□□□ 1.01
LINC01945-201ENST00000419784 PPP4R3CPQ6ZMV5 832 aa20.99■□□□□ 0.95
LINC01945-201ENST00000419784 DCAF8L1A6NGE4 600 aa20.51■□□□□ 0.87
LINC01945-201ENST00000419784 HOXD11P31277 338 aaPredicted RBP20.49■□□□□ 0.87
LINC01945-201ENST00000419784 CACNB1Q02641 598 aaPredicted RBP20.42■□□□□ 0.86
LINC01945-201ENST00000419784 CNKSR2Q8WXI2 1034 aa20.42■□□□□ 0.86
LINC01945-201ENST00000419784 KCNA4P22459 653 aa20.37■□□□□ 0.85
LINC01945-201ENST00000419784 NCBP3Q53F19 620 aaKnown RBP20.36■□□□□ 0.85
LINC01945-201ENST00000419784 RNF216Q9NWF9 866 aaPredicted RBP20.3■□□□□ 0.84
LINC01945-201ENST00000419784 RNF39Q9H2S5 420 aa20.16■□□□□ 0.82
LINC01945-201ENST00000419784 NPM3O75607 178 aaKnown RBP20.12■□□□□ 0.81
LINC01945-201ENST00000419784 C1QBPQ07021 282 aaKnown RBP19.86■□□□□ 0.77
LINC01945-201ENST00000419784 DNAJC5BQ9UF47 199 aa19.85■□□□□ 0.77
LINC01945-201ENST00000419784 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.54■□□□□ 0.72
LINC01945-201ENST00000419784 SLC4A1APQ9BWU0 796 aaKnown RBP19.34■□□□□ 0.69
LINC01945-201ENST00000419784 U3KPZ7 1027 aaPredicted RBP19.09■□□□□ 0.65
LINC01945-201ENST00000419784 SLC4A2P04920 1241 aa19.04■□□□□ 0.64
LINC01945-201ENST00000419784 CAPN15O75808 1086 aa18.87■□□□□ 0.61
LINC01945-201ENST00000419784 SPINK5Q9NQ38 1064 aaPredicted RBP18.87■□□□□ 0.61
LINC01945-201ENST00000419784 DSG3P32926 999 aa18.79■□□□□ 0.6
LINC01945-201ENST00000419784 ZBTB22O15209 634 aa18.77■□□□□ 0.6
LINC01945-201ENST00000419784 FOXD4L1Q9NU39 408 aa18.76■□□□□ 0.59
LINC01945-201ENST00000419784 EHMT2Q96KQ7 1210 aa18.64■□□□□ 0.57
LINC01945-201ENST00000419784 APLP2Q06481 763 aa18.58■□□□□ 0.56
LINC01945-201ENST00000419784 MYCNP04198 464 aaPredicted RBP18.57■□□□□ 0.56
LINC01945-201ENST00000419784 CSRNP3Q8WYN3 585 aa18.52■□□□□ 0.56
LINC01945-201ENST00000419784 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.51■□□□□ 0.55
LINC01945-201ENST00000419784 TRHP20396 242 aaPredicted RBP18.51■□□□□ 0.55
LINC01945-201ENST00000419784 HNRNPUL2Q1KMD3 747 aaKnown RBP18.51■□□□□ 0.55
LINC01945-201ENST00000419784 ZNF219Q9P2Y4 722 aaPredicted RBP18.49■□□□□ 0.55
LINC01945-201ENST00000419784 ABCB7O75027 752 aa18.41■□□□□ 0.54
LINC01945-201ENST00000419784 SAMD1Q6SPF0 538 aaPredicted RBP18.39■□□□□ 0.53
LINC01945-201ENST00000419784 POTEHQ6S545 545 aa18.33■□□□□ 0.52
LINC01945-201ENST00000419784 ATF5Q9Y2D1 282 aaPredicted RBP18.13■□□□□ 0.49
LINC01945-201ENST00000419784 ATXN8OSP0DMR3 200 aa18.12■□□□□ 0.49
LINC01945-201ENST00000419784 POLA2Q14181 598 aa17.97■□□□□ 0.47
LINC01945-201ENST00000419784 RBM42Q9BTD8 480 aaKnown RBP17.97■□□□□ 0.47
LINC01945-201ENST00000419784 CHRDL2Q6WN34 429 aa17.65■□□□□ 0.42
LINC01945-201ENST00000419784 ZBTB12Q9Y330 459 aaPredicted RBP17.62■□□□□ 0.41
LINC01945-201ENST00000419784 AKT1S1Q96B36 256 aa17.5■□□□□ 0.39
LINC01945-201ENST00000419784 OSCARQ8IYS5 282 aa17.41■□□□□ 0.38
LINC01945-201ENST00000419784 MKRN4PQ13434 485 aaPredicted RBP17.33■□□□□ 0.36
LINC01945-201ENST00000419784 REM2Q8IYK8 340 aaPredicted RBP17.32■□□□□ 0.36
LINC01945-201ENST00000419784 FBLN2P98095 1184 aa17.31■□□□□ 0.36
LINC01945-201ENST00000419784 PIP4P2Q8N4L2 257 aa17.17■□□□□ 0.34
LINC01945-201ENST00000419784 PITPNM1O00562 1244 aa17.15■□□□□ 0.34
LINC01945-201ENST00000419784 SP7Q8TDD2 431 aaPredicted RBP17.09■□□□□ 0.33
LINC01945-201ENST00000419784 SPDYE2BA6NHP3 402 aa17.03■□□□□ 0.32
LINC01945-201ENST00000419784 SPDYE6P0CI01 402 aa17.03■□□□□ 0.32
LINC01945-201ENST00000419784 FXR2P51116 673 aaKnown RBP eCLIP17.03■□□□□ 0.32
LINC01945-201ENST00000419784 SPDYE2Q495Y8 402 aa17.03■□□□□ 0.32
LINC01945-201ENST00000419784 HAX1O00165 279 aa16.93■□□□□ 0.3
LINC01945-201ENST00000419784 ZNF692Q9BU19 519 aaPredicted RBP16.87■□□□□ 0.29
LINC01945-201ENST00000419784 SSUH2Q9Y2M2 353 aa16.86■□□□□ 0.29
LINC01945-201ENST00000419784 SPDYE4A6NLX3 237 aa16.83■□□□□ 0.28
LINC01945-201ENST00000419784 SPDYE1Q8NFV5 336 aaPredicted RBP16.8■□□□□ 0.28
LINC01945-201ENST00000419784 CLEC11AQ9Y240 323 aa16.77■□□□□ 0.28
LINC01945-201ENST00000419784 FKBP8Q14318 412 aa16.72■□□□□ 0.27
LINC01945-201ENST00000419784 PRKAR2AP13861 404 aaKnown RBP16.71■□□□□ 0.27
LINC01945-201ENST00000419784 EVX2Q03828 476 aa16.67■□□□□ 0.26
LINC01945-201ENST00000419784 PABPN1Q86U42 306 aaKnown RBP eCLIP16.65■□□□□ 0.26
LINC01945-201ENST00000419784 PROM2Q8N271 834 aa16.59■□□□□ 0.25
LINC01945-201ENST00000419784 C19orf67A6NJJ6 358 aa16.5■□□□□ 0.23
LINC01945-201ENST00000419784 PRR29P0C7W0 189 aa16.47■□□□□ 0.23
LINC01945-201ENST00000419784 CHADLQ6NUI6 762 aa16.45■□□□□ 0.22
LINC01945-201ENST00000419784 STAG3Q9UJ98 1225 aa16.33■□□□□ 0.2
LINC01945-201ENST00000419784 GABBR2O75899 941 aa16.3■□□□□ 0.2
LINC01945-201ENST00000419784 FARP1Q9Y4F1 1045 aaPredicted RBP16.21■□□□□ 0.19
LINC01945-201ENST00000419784 CD44P16070 742 aaKnown RBP16.17■□□□□ 0.18
LINC01945-201ENST00000419784 FBXO3Q9UK99 471 aa16.14■□□□□ 0.17
LINC01945-201ENST00000419784 CREBZFQ9NS37 354 aa16.05■□□□□ 0.16
LINC01945-201ENST00000419784 LHX8Q68G74 356 aa16.02■□□□□ 0.16
LINC01945-201ENST00000419784 CLCN6P51797 869 aa16.01■□□□□ 0.15
LINC01945-201ENST00000419784 VASPP50552 380 aaPredicted RBP15.96■□□□□ 0.15
LINC01945-201ENST00000419784 MIER1Q8N108 512 aa15.95■□□□□ 0.14
LINC01945-201ENST00000419784 POTEIP0CG38 1075 aa15.94■□□□□ 0.14
LINC01945-201ENST00000419784 PLCD3Q8N3E9 789 aa15.91■□□□□ 0.14
LINC01945-201ENST00000419784 ZNF579Q8NAF0 562 aaKnown RBP15.91■□□□□ 0.14
LINC01945-201ENST00000419784 MNX1P50219 401 aaPredicted RBP15.9■□□□□ 0.14
LINC01945-201ENST00000419784 ZRANB1Q9UGI0 708 aa15.9■□□□□ 0.14
LINC01945-201ENST00000419784 DCBLD2Q96PD2 775 aa15.85■□□□□ 0.13
LINC01945-201ENST00000419784 PLEKHG5O94827 1062 aa15.84■□□□□ 0.13
LINC01945-201ENST00000419784 PAK3O75914 559 aaPredicted RBP15.76■□□□□ 0.11
LINC01945-201ENST00000419784 IFNLR1Q8IU57 520 aaPredicted RBP15.75■□□□□ 0.11
LINC01945-201ENST00000419784 ZBTB47Q9UFB7 747 aaPredicted RBP15.74■□□□□ 0.11
LINC01945-201ENST00000419784 NPM1P06748 294 aaKnown RBP eCLIP15.73■□□□□ 0.11
LINC01945-201ENST00000419784 GALR2O43603 387 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms