Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RIF1Q5UIP0 AL354798.1-201ENST00000622505 329 ntBASIC4.42□□□□□ -1.7
RIF1Q5UIP0 U3.53-201ENST00000628922 216 ntBASIC4.42□□□□□ -1.7
RIF1Q5UIP0 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
RIF1Q5UIP0 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RIF1Q5UIP0 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RIF1Q5UIP0 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RIF1Q5UIP0 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.42□□□□□ -1.7
RIF1Q5UIP0 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.42□□□□□ -1.7
RIF1Q5UIP0 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.42□□□□□ -1.7
RIF1Q5UIP0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RIF1Q5UIP0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RIF1Q5UIP0 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RIF1Q5UIP0 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.42□□□□□ -1.7
RIF1Q5UIP0 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
RIF1Q5UIP0 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC4.42□□□□□ -1.7
RIF1Q5UIP0 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RIF1Q5UIP0 RN7SKP74-201ENST00000362849 309 ntBASIC4.41□□□□□ -1.7
RIF1Q5UIP0 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RIF1Q5UIP0 AC096664.2-201ENST00000411843 406 ntBASIC4.41□□□□□ -1.7
RIF1Q5UIP0 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RIF1Q5UIP0 AL390879.1-201ENST00000439143 386 ntBASIC4.41□□□□□ -1.7
RIF1Q5UIP0 RPL7P9-201ENST00000468715 747 ntBASIC4.41□□□□□ -1.7
RIF1Q5UIP0 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC4.41□□□□□ -1.7
RIF1Q5UIP0 AC099522.1-202ENST00000514718 367 ntBASIC4.41□□□□□ -1.7
RIF1Q5UIP0 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.41□□□□□ -1.7
RIF1Q5UIP0 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RIF1Q5UIP0 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RIF1Q5UIP0 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
RIF1Q5UIP0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.41□□□□□ -1.7
RIF1Q5UIP0 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
RIF1Q5UIP0 HSPD1P8-201ENST00000400121 1658 ntBASIC4.41□□□□□ -1.7
RIF1Q5UIP0 AC092821.2-201ENST00000545710 2042 ntBASIC4.41□□□□□ -1.7
RIF1Q5UIP0 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RIF1Q5UIP0 AC004980.3-201ENST00000447046 365 ntBASIC4.41□□□□□ -1.7
RIF1Q5UIP0 UBE2DNL-203ENST00000474922 222 ntBASIC4.41□□□□□ -1.7
RIF1Q5UIP0 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.41□□□□□ -1.7
RIF1Q5UIP0 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RIF1Q5UIP0 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
RIF1Q5UIP0 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
RIF1Q5UIP0 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC4.41□□□□□ -1.7
RIF1Q5UIP0 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.41□□□□□ -1.7
RIF1Q5UIP0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RIF1Q5UIP0 AL360270.2-201ENST00000562952 5985 ntBASIC4.41□□□□□ -1.7
RIF1Q5UIP0 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RIF1Q5UIP0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.41□□□□□ -1.7
RIF1Q5UIP0 AC027228.2-201ENST00000567141 2154 ntBASIC4.41□□□□□ -1.7
RIF1Q5UIP0 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.41□□□□□ -1.7
RIF1Q5UIP0 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.41□□□□□ -1.7
RIF1Q5UIP0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
RIF1Q5UIP0 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.4□□□□□ -1.7
RIF1Q5UIP0 PLGLA-201ENST00000465668 449 ntBASIC4.4□□□□□ -1.7
RIF1Q5UIP0 AL136126.1-201ENST00000473603 402 ntBASIC4.4□□□□□ -1.7
RIF1Q5UIP0 RPS29P2-201ENST00000479278 136 ntBASIC4.4□□□□□ -1.7
RIF1Q5UIP0 RPS4XP15-201ENST00000489210 795 ntBASIC4.4□□□□□ -1.7
RIF1Q5UIP0 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RIF1Q5UIP0 AC084824.2-201ENST00000548906 345 ntBASIC4.4□□□□□ -1.7
RIF1Q5UIP0 AL606490.9-201ENST00000603331 271 ntBASIC4.4□□□□□ -1.7
RIF1Q5UIP0 AC073137.1-201ENST00000605636 634 ntBASIC4.4□□□□□ -1.7
RIF1Q5UIP0 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC4.4□□□□□ -1.7
RIF1Q5UIP0 AC010608.2-201ENST00000624830 470 ntBASIC4.4□□□□□ -1.7
RIF1Q5UIP0 AP001002.2-201ENST00000625137 386 ntBASIC4.4□□□□□ -1.7
RIF1Q5UIP0 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.4□□□□□ -1.7
RIF1Q5UIP0 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RIF1Q5UIP0 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RIF1Q5UIP0 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RIF1Q5UIP0 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RIF1Q5UIP0 AL158163.1-201ENST00000603915 1649 ntBASIC4.4□□□□□ -1.7
RIF1Q5UIP0 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RIF1Q5UIP0 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RIF1Q5UIP0 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC4.4□□□□□ -1.71
RIF1Q5UIP0 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RIF1Q5UIP0 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.4□□□□□ -1.71
RIF1Q5UIP0 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.4□□□□□ -1.71
RIF1Q5UIP0 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.4□□□□□ -1.71
RIF1Q5UIP0 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.4□□□□□ -1.71
RIF1Q5UIP0 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
RIF1Q5UIP0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RIF1Q5UIP0 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RIF1Q5UIP0 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.4□□□□□ -1.71
RIF1Q5UIP0 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.4□□□□□ -1.71
RIF1Q5UIP0 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.4□□□□□ -1.71
RIF1Q5UIP0 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC4.4□□□□□ -1.71
RIF1Q5UIP0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RIF1Q5UIP0 Y_RNA.500-201ENST00000384466 111 ntBASIC4.39□□□□□ -1.71
RIF1Q5UIP0 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 SNRPFP1-201ENST00000414761 252 ntBASIC4.39□□□□□ -1.71
RIF1Q5UIP0 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 SETP6-201ENST00000479329 568 ntBASIC4.39□□□□□ -1.71
RIF1Q5UIP0 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 IMPA1P1-201ENST00000510718 842 ntBASIC4.39□□□□□ -1.71
RIF1Q5UIP0 RN7SKP98-201ENST00000517070 156 ntBASIC4.39□□□□□ -1.71
RIF1Q5UIP0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 BNIP3P35-201ENST00000604530 490 ntBASIC4.39□□□□□ -1.71
RIF1Q5UIP0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.39□□□□□ -1.71
RIF1Q5UIP0 AC007546.1-201ENST00000619452 559 ntBASIC4.39□□□□□ -1.71
RIF1Q5UIP0 OR6C71P-202ENST00000641886 1107 ntBASIC4.39□□□□□ -1.71
RIF1Q5UIP0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms