Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.37□□□□□ -1.39
CNGA1P29973 MIR4646-201ENST00000580775 63 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 AC245036.5-201ENST00000596330 847 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 ELOCP35-201ENST00000604289 336 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 AC133644.2-201ENST00000608142 540 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 AC000068.2-201ENST00000608816 460 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 AL118522.2-201ENST00000616045 615 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 AP002791.1-201ENST00000623291 381 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 AP001784.1-201ENST00000624107 428 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNGA1P29973 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.37□□□□□ -1.39
CNGA1P29973 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNGA1P29973 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CNGA1P29973 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNGA1P29973 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.37□□□□□ -1.39
CNGA1P29973 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.37□□□□□ -1.39
CNGA1P29973 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.37□□□□□ -1.39
CNGA1P29973 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.37□□□□□ -1.39
CNGA1P29973 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CNGA1P29973 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CNGA1P29973 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CNGA1P29973 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.37□□□□□ -1.39
CNGA1P29973 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CNGA1P29973 RNF6P1-201ENST00000444889 1784 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
CNGA1P29973 AP000473.2-201ENST00000602659 1537 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CNGA1P29973 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNGA1P29973 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNGA1P29973 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNGA1P29973 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNGA1P29973 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNGA1P29973 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNGA1P29973 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNGA1P29973 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNGA1P29973 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNGA1P29973 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNGA1P29973 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNGA1P29973 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNGA1P29973 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNGA1P29973 RNU6-636P-201ENST00000384598 107 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 RNU6-1242P-201ENST00000391052 103 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNGA1P29973 PEX12P1-201ENST00000400284 1048 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 OR5M12P-201ENST00000423388 929 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.36□□□□□ -1.39
CNGA1P29973 RPL12P28-201ENST00000430852 489 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 FTLP19-201ENST00000433300 394 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.36□□□□□ -1.39
CNGA1P29973 EEF1A1P39-201ENST00000440791 250 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 Z80107.2-201ENST00000445127 392 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 AC004129.2-201ENST00000457229 287 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 RPS23P2-201ENST00000463671 415 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 AC091959.2-201ENST00000477363 321 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.36□□□□□ -1.39
CNGA1P29973 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.36□□□□□ -1.39
CNGA1P29973 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.36□□□□□ -1.39
CNGA1P29973 AC023538.1-201ENST00000534576 736 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 AC126177.5-201ENST00000549599 178 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.36□□□□□ -1.39
CNGA1P29973 OR4U1P-201ENST00000554958 912 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 MTND4P33-201ENST00000556706 766 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.36□□□□□ -1.39
CNGA1P29973 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.36□□□□□ -1.39
CNGA1P29973 MIR6820-201ENST00000611508 62 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 AL049539.1-201ENST00000611964 459 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.36□□□□□ -1.39
CNGA1P29973 FRG1EP-201ENST00000634469 770 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.36□□□□□ -1.39
CNGA1P29973 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.36□□□□□ -1.39
CNGA1P29973 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.36□□□□□ -1.39
CNGA1P29973 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNGA1P29973 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNGA1P29973 MFSD8-239ENST00000641590 2479 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 AP005435.3-201ENST00000531260 3198 ntBASIC6.36□□□□□ -1.39
CNGA1P29973 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.36□□□□□ -1.39
CNGA1P29973 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNGA1P29973 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNGA1P29973 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNGA1P29973 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.35□□□□□ -1.39
CNGA1P29973 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.35□□□□□ -1.39
CNGA1P29973 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
CNGA1P29973 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CNGA1P29973 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
CNGA1P29973 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNGA1P29973 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CNGA1P29973 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CNGA1P29973 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.35□□□□□ -1.39
CNGA1P29973 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNGA1P29973 MIR1303-201ENST00000408625 86 ntBASIC6.35□□□□□ -1.39
CNGA1P29973 RPS24P7-201ENST00000416921 246 ntBASIC6.35□□□□□ -1.39
CNGA1P29973 AL354868.1-201ENST00000417077 482 ntBASIC6.35□□□□□ -1.39
CNGA1P29973 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.35□□□□□ -1.39
CNGA1P29973 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.35□□□□□ -1.39
CNGA1P29973 HIGD1AP12-201ENST00000427832 281 ntBASIC6.35□□□□□ -1.39
CNGA1P29973 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.35□□□□□ -1.39
CNGA1P29973 FAM96AP1-201ENST00000430879 482 ntBASIC6.35□□□□□ -1.39
CNGA1P29973 NANOGP2-201ENST00000435391 727 ntBASIC6.35□□□□□ -1.39
CNGA1P29973 HMGB1P45-201ENST00000435986 653 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms