Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 HNRNPCP4-201ENST00000571636 900 ntBASIC5.88□□□□□ -1.47
COL5A2P05997 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.88□□□□□ -1.47
COL5A2P05997 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.88□□□□□ -1.47
COL5A2P05997 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.88□□□□□ -1.47
COL5A2P05997 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.88□□□□□ -1.47
COL5A2P05997 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL5A2P05997 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL5A2P05997 AL592182.3-201ENST00000642132 3304 ntBASIC5.87□□□□□ -1.47
COL5A2P05997 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
COL5A2P05997 AP001029.2-203ENST00000589795 4910 ntBASIC5.87□□□□□ -1.47
COL5A2P05997 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL5A2P05997 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL5A2P05997 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL5A2P05997 RNA5SP130-201ENST00000364431 114 ntBASIC5.87□□□□□ -1.47
COL5A2P05997 SNORA62.3-201ENST00000365110 153 ntBASIC5.87□□□□□ -1.47
COL5A2P05997 MT-RNR1-201ENST00000389680 954 ntBASIC5.87□□□□□ -1.47
COL5A2P05997 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL5A2P05997 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.87□□□□□ -1.47
COL5A2P05997 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.87□□□□□ -1.47
COL5A2P05997 RPS29P7-201ENST00000439662 171 ntBASIC5.87□□□□□ -1.47
COL5A2P05997 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.87□□□□□ -1.47
COL5A2P05997 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.87□□□□□ -1.47
COL5A2P05997 HMGB3P14-201ENST00000494195 599 ntBASIC5.87□□□□□ -1.47
COL5A2P05997 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.87□□□□□ -1.47
COL5A2P05997 AC087477.6-201ENST00000559595 843 ntBASIC5.87□□□□□ -1.47
COL5A2P05997 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.87□□□□□ -1.47
COL5A2P05997 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL5A2P05997 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL5A2P05997 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.87□□□□□ -1.47
COL5A2P05997 MIR6875-201ENST00000617506 72 ntBASIC5.87□□□□□ -1.47
COL5A2P05997 AC027228.2-201ENST00000567141 2154 ntBASIC5.87□□□□□ -1.47
COL5A2P05997 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL5A2P05997 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
COL5A2P05997 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
COL5A2P05997 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.86□□□□□ -1.47
COL5A2P05997 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.86□□□□□ -1.47
COL5A2P05997 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.86□□□□□ -1.47
COL5A2P05997 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
COL5A2P05997 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL5A2P05997 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.86□□□□□ -1.47
COL5A2P05997 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL5A2P05997 AL035696.2-201ENST00000407941 709 ntBASIC5.86□□□□□ -1.47
COL5A2P05997 AL590806.1-201ENST00000415818 853 ntBASIC5.86□□□□□ -1.47
COL5A2P05997 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.86□□□□□ -1.47
COL5A2P05997 MRPL50P1-201ENST00000431951 384 ntBASIC5.86□□□□□ -1.47
COL5A2P05997 AL162151.2-201ENST00000448875 158 ntBASIC5.86□□□□□ -1.47
COL5A2P05997 RPS27AP17-201ENST00000463344 455 ntBASIC5.86□□□□□ -1.47
COL5A2P05997 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.86□□□□□ -1.47
COL5A2P05997 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.86□□□□□ -1.47
COL5A2P05997 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.86□□□□□ -1.47
COL5A2P05997 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
COL5A2P05997 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
COL5A2P05997 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL5A2P05997 AC099654.3-201ENST00000447087 1546 ntBASIC5.85□□□□□ -1.47
COL5A2P05997 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL5A2P05997 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
COL5A2P05997 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.85□□□□□ -1.47
COL5A2P05997 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.85□□□□□ -1.47
COL5A2P05997 RNA5SP513-201ENST00000364648 118 ntBASIC5.85□□□□□ -1.47
COL5A2P05997 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL5A2P05997 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
COL5A2P05997 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.85□□□□□ -1.47
COL5A2P05997 MRPS21P3-201ENST00000436696 262 ntBASIC5.85□□□□□ -1.47
COL5A2P05997 RPS20P4-201ENST00000461659 355 ntBASIC5.85□□□□□ -1.47
COL5A2P05997 AC146944.2-203ENST00000502493 354 ntBASIC5.85□□□□□ -1.47
COL5A2P05997 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.85□□□□□ -1.47
COL5A2P05997 FTH1P21-201ENST00000512179 511 ntBASIC5.85□□□□□ -1.47
COL5A2P05997 AC139495.1-202ENST00000513164 354 ntBASIC5.85□□□□□ -1.47
COL5A2P05997 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.85□□□□□ -1.47
COL5A2P05997 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.85□□□□□ -1.47
COL5A2P05997 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.85□□□□□ -1.47
COL5A2P05997 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.85□□□□□ -1.47
COL5A2P05997 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
COL5A2P05997 MIR6075-201ENST00000620782 95 ntBASIC5.85□□□□□ -1.47
COL5A2P05997 AC112484.5-201ENST00000624189 228 ntBASIC5.85□□□□□ -1.47
COL5A2P05997 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL5A2P05997 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.85□□□□□ -1.47
COL5A2P05997 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL5A2P05997 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.85□□□□□ -1.47
COL5A2P05997 SNX18P3-202ENST00000565670 1750 ntBASIC5.85□□□□□ -1.47
COL5A2P05997 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL5A2P05997 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL5A2P05997 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
COL5A2P05997 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL5A2P05997 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL5A2P05997 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL5A2P05997 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL5A2P05997 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.84□□□□□ -1.47
COL5A2P05997 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.84□□□□□ -1.47
COL5A2P05997 AC079809.1-201ENST00000415468 276 ntBASIC5.84□□□□□ -1.47
COL5A2P05997 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.84□□□□□ -1.47
COL5A2P05997 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.84□□□□□ -1.47
COL5A2P05997 AC245028.2-201ENST00000458673 253 ntBASIC5.84□□□□□ -1.47
COL5A2P05997 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.84□□□□□ -1.47
COL5A2P05997 AC053481.4-201ENST00000583164 216 ntBASIC5.84□□□□□ -1.47
COL5A2P05997 RNU4-89P-201ENST00000607443 133 ntBASIC5.84□□□□□ -1.47
COL5A2P05997 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL5A2P05997 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL5A2P05997 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
COL5A2P05997 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms