Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF43Q68DV7 AC006213.6-201ENST00000623722 4179 ntBASIC6.69□□□□□ -1.34
RNF43Q68DV7 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF43Q68DV7 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 AC007114.2-201ENST00000576014 4281 ntBASIC6.69□□□□□ -1.34
RNF43Q68DV7 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF43Q68DV7 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF43Q68DV7 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RNF43Q68DV7 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RNF43Q68DV7 RNU6-1331P-201ENST00000363658 106 ntBASIC6.69□□□□□ -1.34
RNF43Q68DV7 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 MIR188-201ENST00000385034 86 ntBASIC6.69□□□□□ -1.34
RNF43Q68DV7 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RNF43Q68DV7 GCNT1P4-201ENST00000404096 329 ntBASIC6.69□□□□□ -1.34
RNF43Q68DV7 FCF1P10-201ENST00000407590 479 ntBASIC6.69□□□□□ -1.34
RNF43Q68DV7 RN7SKP206-201ENST00000410823 293 ntBASIC6.69□□□□□ -1.34
RNF43Q68DV7 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 AL391987.1-201ENST00000441025 200 ntBASIC6.69□□□□□ -1.34
RNF43Q68DV7 AC093019.1-201ENST00000443135 252 ntBASIC6.69□□□□□ -1.34
RNF43Q68DV7 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RNF43Q68DV7 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 DDX39BP2-208ENST00000453923 258 ntBASIC6.69□□□□□ -1.34
RNF43Q68DV7 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 VPS26AP1-201ENST00000483197 979 ntBASIC6.69□□□□□ -1.34
RNF43Q68DV7 HMGN1P12-201ENST00000499125 195 ntBASIC6.69□□□□□ -1.34
RNF43Q68DV7 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 RNU6-358P-201ENST00000516564 75 ntBASIC6.69□□□□□ -1.34
RNF43Q68DV7 FAM92A1P1-201ENST00000528023 890 ntBASIC6.69□□□□□ -1.34
RNF43Q68DV7 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 AC023968.1-201ENST00000560719 475 ntBASIC6.69□□□□□ -1.34
RNF43Q68DV7 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RNF43Q68DV7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 AL021368.3-201ENST00000607119 578 ntBASIC6.69□□□□□ -1.34
RNF43Q68DV7 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 AL442067.2-201ENST00000614033 363 ntBASIC6.69□□□□□ -1.34
RNF43Q68DV7 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RNF43Q68DV7 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF43Q68DV7 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF43Q68DV7 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF43Q68DV7 AL353743.4-201ENST00000422653 1547 ntBASIC6.69□□□□□ -1.34
RNF43Q68DV7 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RNF43Q68DV7 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RNF43Q68DV7 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF43Q68DV7 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 SMG1P5-202ENST00000529428 4219 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 SMG1P2-201ENST00000566127 4221 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RNF43Q68DV7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RNF43Q68DV7 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 AC104966.1-201ENST00000467010 1464 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RNF43Q68DV7 AL079343.1-201ENST00000572358 1771 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF43Q68DV7 PSG10P-201ENST00000501199 1500 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF43Q68DV7 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RNF43Q68DV7 RNA5SP514-201ENST00000363717 111 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 RNU6-353P-201ENST00000364266 108 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 Y_RNA.326-201ENST00000365176 113 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 Y_RNA.356-201ENST00000365475 113 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 Y_RNA.372-201ENST00000365599 102 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 LCN1P2-201ENST00000372030 223 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF43Q68DV7 RNU6-1227P-201ENST00000383981 107 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 RPL7P58-201ENST00000402913 758 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms