Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.91□□□□□ -1.62
CDH4P55283 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDH4P55283 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDH4P55283 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CDH4P55283 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDH4P55283 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDH4P55283 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.9□□□□□ -1.62
CDH4P55283 MIR585-201ENST00000384887 94 ntBASIC4.9□□□□□ -1.63
CDH4P55283 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CDH4P55283 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CDH4P55283 OR51A6P-201ENST00000418680 1004 ntBASIC4.9□□□□□ -1.63
CDH4P55283 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH4P55283 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.9□□□□□ -1.63
CDH4P55283 RGS17P1-201ENST00000423358 553 ntBASIC4.9□□□□□ -1.63
CDH4P55283 HMGB3P10-201ENST00000434734 572 ntBASIC4.9□□□□□ -1.63
CDH4P55283 AC092447.2-201ENST00000435487 669 ntBASIC4.9□□□□□ -1.63
CDH4P55283 CYCSP11-201ENST00000436426 315 ntBASIC4.9□□□□□ -1.63
CDH4P55283 AC016831.4-201ENST00000438302 307 ntBASIC4.9□□□□□ -1.63
CDH4P55283 NPM1P33-201ENST00000438918 872 ntBASIC4.9□□□□□ -1.63
CDH4P55283 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH4P55283 GTF3AP5-201ENST00000442645 697 ntBASIC4.9□□□□□ -1.63
CDH4P55283 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH4P55283 RPL7AP10-201ENST00000481016 791 ntBASIC4.9□□□□□ -1.63
CDH4P55283 IGLV2-34-201ENST00000490007 283 ntBASIC4.9□□□□□ -1.63
CDH4P55283 OR9N1P-201ENST00000491296 333 ntBASIC4.9□□□□□ -1.63
CDH4P55283 AC073358.1-201ENST00000505671 684 ntBASIC4.9□□□□□ -1.63
CDH4P55283 RNA5SP249-201ENST00000516127 99 ntBASIC4.9□□□□□ -1.63
CDH4P55283 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.9□□□□□ -1.63
CDH4P55283 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH4P55283 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH4P55283 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH4P55283 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH4P55283 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH4P55283 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH4P55283 CYCSP40-201ENST00000575927 294 ntBASIC4.9□□□□□ -1.63
CDH4P55283 MTND2P13-201ENST00000577438 1039 ntBASIC4.9□□□□□ -1.63
CDH4P55283 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.9□□□□□ -1.63
CDH4P55283 AC004241.3-201ENST00000611728 517 ntBASIC4.9□□□□□ -1.63
CDH4P55283 MIR6853-201ENST00000619642 74 ntBASIC4.9□□□□□ -1.63
CDH4P55283 AC073342.3-201ENST00000624211 193 ntBASIC4.9□□□□□ -1.63
CDH4P55283 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH4P55283 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH4P55283 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH4P55283 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH4P55283 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CDH4P55283 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CDH4P55283 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH4P55283 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CDH4P55283 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH4P55283 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH4P55283 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH4P55283 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDH4P55283 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.89□□□□□ -1.63
CDH4P55283 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDH4P55283 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDH4P55283 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDH4P55283 MIR298-201ENST00000401212 88 ntBASIC4.89□□□□□ -1.63
CDH4P55283 U3.35-201ENST00000408405 208 ntBASIC4.89□□□□□ -1.63
CDH4P55283 UBE2V2P1-201ENST00000434717 398 ntBASIC4.89□□□□□ -1.63
CDH4P55283 MTND4LP12-201ENST00000448237 295 ntBASIC4.89□□□□□ -1.63
CDH4P55283 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.89□□□□□ -1.63
CDH4P55283 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH4P55283 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.89□□□□□ -1.63
CDH4P55283 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.89□□□□□ -1.63
CDH4P55283 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
CDH4P55283 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH4P55283 AC025857.1-201ENST00000525252 377 ntBASIC4.89□□□□□ -1.63
CDH4P55283 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH4P55283 MIR4472-2-201ENST00000582069 67 ntBASIC4.89□□□□□ -1.63
CDH4P55283 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH4P55283 AC098935.2-201ENST00000604222 466 ntBASIC4.89□□□□□ -1.63
CDH4P55283 AL161616.1-201ENST00000611867 286 ntBASIC4.89□□□□□ -1.63
CDH4P55283 NF1P10-201ENST00000613227 742 ntBASIC4.89□□□□□ -1.63
CDH4P55283 AP001005.3-201ENST00000622049 129 ntBASIC4.89□□□□□ -1.63
CDH4P55283 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH4P55283 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH4P55283 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CDH4P55283 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CDH4P55283 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CDH4P55283 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH4P55283 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH4P55283 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH4P55283 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.88□□□□□ -1.63
CDH4P55283 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.88□□□□□ -1.63
CDH4P55283 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH4P55283 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH4P55283 RNVU1-6-201ENST00000364688 164 ntBASIC4.88□□□□□ -1.63
CDH4P55283 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH4P55283 RNU1-82P-201ENST00000390851 165 ntBASIC4.88□□□□□ -1.63
CDH4P55283 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH4P55283 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.88□□□□□ -1.63
CDH4P55283 RN7SKP247-201ENST00000411094 308 ntBASIC4.88□□□□□ -1.63
CDH4P55283 AL591848.1-201ENST00000413092 322 ntBASIC4.88□□□□□ -1.63
CDH4P55283 GLUD1P9-201ENST00000420997 1173 ntBASIC4.88□□□□□ -1.63
CDH4P55283 OR5M12P-201ENST00000423388 929 ntBASIC4.88□□□□□ -1.63
CDH4P55283 FABP7P1-201ENST00000424004 391 ntBASIC4.88□□□□□ -1.63
CDH4P55283 EIF4HP2-201ENST00000424380 563 ntBASIC4.88□□□□□ -1.63
CDH4P55283 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH4P55283 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH4P55283 RPL36AP15-201ENST00000444514 266 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms