Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 LRRC37BP1-201ENST00000398851 714 ntBASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 RN7SKP126-201ENST00000411143 300 ntBASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 RPS20P1-201ENST00000434853 354 ntBASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 HMGB1P26-201ENST00000452520 628 ntBASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 AC092647.2-201ENST00000452998 253 ntBASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 RN7SL172P-201ENST00000460535 303 ntBASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 RPL23AP12-201ENST00000467573 473 ntBASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 AC116562.1-201ENST00000485355 781 ntBASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 AC072052.1-201ENST00000496556 306 ntBASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 RNU6-1004P-201ENST00000516584 111 ntBASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 RN7SKP260-201ENST00000516907 149 ntBASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 AC007225.2-201ENST00000562529 256 ntBASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 AC139769.3-201ENST00000618383 175 ntBASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 AL118508.4-201ENST00000624142 1176 ntBASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 PABPC1P6-201ENST00000445594 1829 ntBASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 DDX18P4-201ENST00000511690 1966 ntBASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 AC063976.2-201ENST00000425667 3556 ntBASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM5Q96HC4 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 OR5T3-201ENST00000303059 1023 ntBASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 AC019070.1-201ENST00000415008 1024 ntBASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 QRSL1P2-201ENST00000418582 964 ntBASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 AL450263.2-201ENST00000439400 589 ntBASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 RN7SL517P-201ENST00000462240 305 ntBASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 AC117394.1-201ENST00000477323 567 ntBASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 AC079841.1-201ENST00000481228 950 ntBASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 AC008410.1-201ENST00000483777 339 ntBASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 UBA52P7-201ENST00000486088 380 ntBASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 RPL7L1P4-201ENST00000513004 707 ntBASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 AC012339.2-201ENST00000523996 453 ntBASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 SNRPGP1-201ENST00000553864 222 ntBASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 AC110792.4-201ENST00000609843 298 ntBASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 THAP12P4-201ENST00000528321 2266 ntBASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
PDLIM5Q96HC4 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM5Q96HC4 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM5Q96HC4 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM5Q96HC4 AL731566.1-201ENST00000620490 1937 ntBASIC4.92□□□□□ -1.62
PDLIM5Q96HC4 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PDLIM5Q96HC4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PDLIM5Q96HC4 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM5Q96HC4 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PDLIM5Q96HC4 AL589826.1-201ENST00000340697 249 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms