RNA–Protein interactions for RNA: ENST00000439079.1

LINC00415-201, long intergenic non-protein coding RNA 415, humanhuman

TSL 3 BASIC

Gene LINC00415, Length 435 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00415-201ENST00000439079 CHIC1Q5VXU3 224 aa14.45□□□□□ -0.1
LINC00415-201ENST00000439079 AEBP2Q6ZN18 517 aaPredicted RBP14.36□□□□□ -0.11
LINC00415-201ENST00000439079 PHF23Q9BUL5 403 aaPredicted RBP12.74□□□□□ -0.37
LINC00415-201ENST00000439079 SENP3Q9H4L4 574 aaPredicted RBP12.16□□□□□ -0.46
LINC00415-201ENST00000439079 PLPPR3Q6T4P5 718 aa11.93□□□□□ -0.5
LINC00415-201ENST00000439079 FOXD1Q16676 465 aa11.21□□□□□ -0.61
LINC00415-201ENST00000439079 ADRA2BP18089 450 aa11.13□□□□□ -0.63
LINC00415-201ENST00000439079 PPP6R1Q9UPN7 881 aa11.11□□□□□ -0.63
LINC00415-201ENST00000439079 KCNA4P22459 653 aa10.75□□□□□ -0.69
LINC00415-201ENST00000439079 PIAS4Q8N2W9 510 aaPredicted RBP10.67□□□□□ -0.7
LINC00415-201ENST00000439079 PPP4R3CPQ6ZMV5 832 aa10.55□□□□□ -0.72
LINC00415-201ENST00000439079 EHMT2Q96KQ7 1210 aa10.48□□□□□ -0.73
LINC00415-201ENST00000439079 NCBP3Q53F19 620 aaKnown RBP10.42□□□□□ -0.74
LINC00415-201ENST00000439079 SLC4A1APQ9BWU0 796 aaKnown RBP10.33□□□□□ -0.76
LINC00415-201ENST00000439079 SLC24A1O60721 1099 aa10.29□□□□□ -0.76
LINC00415-201ENST00000439079 NPM3O75607 178 aaKnown RBP10.24□□□□□ -0.77
LINC00415-201ENST00000439079 SCAF1Q9H7N4 1312 aaKnown RBP10.22□□□□□ -0.77
LINC00415-201ENST00000439079 MSH5O43196 834 aa10.21□□□□□ -0.77
LINC00415-201ENST00000439079 CSRNP3Q8WYN3 585 aa10.19□□□□□ -0.78
LINC00415-201ENST00000439079 CNKSR2Q8WXI2 1034 aa10.18□□□□□ -0.78
LINC00415-201ENST00000439079 MAPK8IP2Q13387 824 aaPredicted RBP9.96□□□□□ -0.82
LINC00415-201ENST00000439079 DNAJC5BQ9UF47 199 aa9.93□□□□□ -0.82
LINC00415-201ENST00000439079 ZBTB22O15209 634 aa9.9□□□□□ -0.82
LINC00415-201ENST00000439079 RNF216Q9NWF9 866 aaPredicted RBP9.88□□□□□ -0.83
LINC00415-201ENST00000439079 NISCHQ9Y2I1 1504 aa9.81□□□□□ -0.84
LINC00415-201ENST00000439079 FOXD4L1Q9NU39 408 aa9.8□□□□□ -0.84
LINC00415-201ENST00000439079 DMRT2Q9Y5R5 561 aa9.76□□□□□ -0.85
LINC00415-201ENST00000439079 HOXD11P31277 338 aaPredicted RBP9.73□□□□□ -0.85
LINC00415-201ENST00000439079 AMER1Q5JTC6 1135 aaPredicted RBP9.7□□□□□ -0.86
LINC00415-201ENST00000439079 SLC4A2P04920 1241 aa9.56□□□□□ -0.88
LINC00415-201ENST00000439079 RTN4Q9NQC3 1192 aaKnown RBP9.52□□□□□ -0.89
LINC00415-201ENST00000439079 MYCNP04198 464 aaPredicted RBP9.46□□□□□ -0.9
LINC00415-201ENST00000439079 ATXN8OSP0DMR3 200 aa9.45□□□□□ -0.9
LINC00415-201ENST00000439079 DCAF8L1A6NGE4 600 aa9.3□□□□□ -0.92
LINC00415-201ENST00000439079 ABCC9O60706 1549 aa9.28□□□□□ -0.92
LINC00415-201ENST00000439079 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.27□□□□□ -0.93
LINC00415-201ENST00000439079 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.22□□□□□ -0.93
LINC00415-201ENST00000439079 HNRNPUL2Q1KMD3 747 aaKnown RBP9.22□□□□□ -0.93
LINC00415-201ENST00000439079 SAMD1Q6SPF0 538 aaPredicted RBP9.19□□□□□ -0.94
LINC00415-201ENST00000439079 FKBP8Q14318 412 aa9.18□□□□□ -0.94
LINC00415-201ENST00000439079 ATF5Q9Y2D1 282 aaPredicted RBP9.15□□□□□ -0.94
LINC00415-201ENST00000439079 U3KPZ7 1027 aaPredicted RBP9.15□□□□□ -0.94
LINC00415-201ENST00000439079 DAXXQ9UER7 740 aaPredicted RBP9.09□□□□□ -0.95
LINC00415-201ENST00000439079 APLP2Q06481 763 aa9.03□□□□□ -0.96
LINC00415-201ENST00000439079 ZNF219Q9P2Y4 722 aaPredicted RBP8.99□□□□□ -0.97
LINC00415-201ENST00000439079 CCDC180Q9P1Z9 1646 aa8.97□□□□□ -0.97
LINC00415-201ENST00000439079 BCANQ96GW7 911 aa8.94□□□□□ -0.98
LINC00415-201ENST00000439079 ARXQ96QS3 562 aa8.88□□□□□ -0.99
LINC00415-201ENST00000439079 TAOK2Q9UL54 1235 aa8.81□□□□□ -1
LINC00415-201ENST00000439079 SPDYE4A6NLX3 237 aa8.8□□□□□ -1
LINC00415-201ENST00000439079 PLCB2Q00722 1185 aa8.8□□□□□ -1
LINC00415-201ENST00000439079 ERICH6Q7L0X2 663 aa8.8□□□□□ -1
LINC00415-201ENST00000439079 FBXO3Q9UK99 471 aa8.79□□□□□ -1
LINC00415-201ENST00000439079 MKRN4PQ13434 485 aaPredicted RBP8.78□□□□□ -1
LINC00415-201ENST00000439079 TRHP20396 242 aaPredicted RBP8.77□□□□□ -1.01
LINC00415-201ENST00000439079 FBLN2P98095 1184 aa8.77□□□□□ -1.01
LINC00415-201ENST00000439079 RNF39Q9H2S5 420 aa8.77□□□□□ -1.01
LINC00415-201ENST00000439079 SPINK5Q9NQ38 1064 aaPredicted RBP8.77□□□□□ -1.01
LINC00415-201ENST00000439079 PRKCSHP14314 528 aaPredicted RBP8.75□□□□□ -1.01
LINC00415-201ENST00000439079 POLA2Q14181 598 aa8.74□□□□□ -1.01
LINC00415-201ENST00000439079 CAPN15O75808 1086 aa8.72□□□□□ -1.01
LINC00415-201ENST00000439079 PROM2Q8N271 834 aa8.72□□□□□ -1.01
LINC00415-201ENST00000439079 C1QBPQ07021 282 aaKnown RBP8.71□□□□□ -1.02
LINC00415-201ENST00000439079 RB1CC1Q8TDY2 1594 aa8.66□□□□□ -1.02
LINC00415-201ENST00000439079 VSIG10Q8N0Z9 540 aa8.66□□□□□ -1.02
LINC00415-201ENST00000439079 ZBTB12Q9Y330 459 aaPredicted RBP8.65□□□□□ -1.02
LINC00415-201ENST00000439079 HAP1P54257 671 aaPredicted RBP8.64□□□□□ -1.03
LINC00415-201ENST00000439079 UNC13AQ9UPW8 1703 aa8.63□□□□□ -1.03
LINC00415-201ENST00000439079 VASPP50552 380 aaPredicted RBP8.62□□□□□ -1.03
LINC00415-201ENST00000439079 TPRNQ4KMQ1 711 aa8.61□□□□□ -1.03
LINC00415-201ENST00000439079 PABPN1Q86U42 306 aaKnown RBP eCLIP8.58□□□□□ -1.04
LINC00415-201ENST00000439079 HOMEZQ8IX15 550 aa8.58□□□□□ -1.04
LINC00415-201ENST00000439079 ABCB7O75027 752 aa8.57□□□□□ -1.04
LINC00415-201ENST00000439079 TIMELESSQ9UNS1 1208 aa8.56□□□□□ -1.04
LINC00415-201ENST00000439079 POTEDQ86YR6 584 aa8.55□□□□□ -1.04
LINC00415-201ENST00000439079 IFNLR1Q8IU57 520 aaPredicted RBP8.54□□□□□ -1.04
LINC00415-201ENST00000439079 BICRAQ9NZM4 1560 aa8.53□□□□□ -1.04
LINC00415-201ENST00000439079 DNAJC5Q9H3Z4 198 aa8.53□□□□□ -1.04
LINC00415-201ENST00000439079 NACADO15069 1562 aa8.52□□□□□ -1.04
LINC00415-201ENST00000439079 TULP1O00294 542 aaPredicted RBP8.51□□□□□ -1.05
LINC00415-201ENST00000439079 DSG3P32926 999 aa8.48□□□□□ -1.05
LINC00415-201ENST00000439079 RANGAP1P46060 587 aaPredicted RBP8.48□□□□□ -1.05
LINC00415-201ENST00000439079 ZNF692Q9BU19 519 aaPredicted RBP8.47□□□□□ -1.05
LINC00415-201ENST00000439079 GTF3C3Q9Y5Q9 886 aa8.46□□□□□ -1.06
LINC00415-201ENST00000439079 SPDYE2BA6NHP3 402 aa8.44□□□□□ -1.06
LINC00415-201ENST00000439079 SPDYE6P0CI01 402 aa8.44□□□□□ -1.06
LINC00415-201ENST00000439079 SPDYE2Q495Y8 402 aa8.44□□□□□ -1.06
LINC00415-201ENST00000439079 STAG3Q9UJ98 1225 aa8.43□□□□□ -1.06
LINC00415-201ENST00000439079 PKD2Q13563 968 aa8.41□□□□□ -1.06
LINC00415-201ENST00000439079 SSUH2Q9Y2M2 353 aa8.41□□□□□ -1.06
LINC00415-201ENST00000439079 CC2D2AQ9P2K1 1620 aa8.4□□□□□ -1.06
LINC00415-201ENST00000439079 OSCARQ8IYS5 282 aa8.4□□□□□ -1.06
LINC00415-201ENST00000439079 KLHL34Q8N239 644 aa8.39□□□□□ -1.07
LINC00415-201ENST00000439079 CECR2Q9BXF3 1484 aa8.38□□□□□ -1.07
LINC00415-201ENST00000439079 SPOCK2Q92563 424 aa8.38□□□□□ -1.07
LINC00415-201ENST00000439079 DCAF8L2P0C7V8 631 aa8.37□□□□□ -1.07
LINC00415-201ENST00000439079 PLCD3Q8N3E9 789 aa8.34□□□□□ -1.07
LINC00415-201ENST00000439079 MIER1Q8N108 512 aa8.31□□□□□ -1.08
LINC00415-201ENST00000439079 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.3□□□□□ -1.08
LINC00415-201ENST00000439079 MYO15BQ96JP2 1530 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms