Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 CYP1D1P-201ENST00000416662 1433 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 AC092447.10-201ENST00000620607 1652 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 AC008627.1-201ENST00000517511 1704 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 RNU6-621P-201ENST00000364752 109 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 Y_RNA.291-201ENST00000364886 113 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 RNU6-359P-201ENST00000365466 108 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 RNU4-20P-201ENST00000365601 151 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 SNORD116-29-201ENST00000384516 83 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 RNU6-316P-201ENST00000391027 107 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 RPL34P3-201ENST00000421454 338 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 AC066692.1-201ENST00000421721 457 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 RAC1P6-201ENST00000423911 575 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 RPSAP32-201ENST00000432681 526 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 AC114755.4-201ENST00000439114 443 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 SEPT14P3-201ENST00000439401 183 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 AC234771.2-201ENST00000445718 597 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 AL732372.2-207ENST00000445840 183 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 HMGB1P16-201ENST00000447155 540 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 TCEA1P1-201ENST00000449716 880 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 SEPT14P2-201ENST00000453405 183 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 C1DP4-201ENST00000455429 424 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 TRBV1-201ENST00000476502 284 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 KCTD9P5-201ENST00000504141 1170 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 AC022868.1-201ENST00000517767 391 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 FO082796.1-201ENST00000523795 183 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 AC034105.3-201ENST00000565294 442 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 MIR4680-201ENST00000580906 66 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 RPSAP68-201ENST00000625020 438 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 EEF1A1P42-201ENST00000613436 1331 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 AL023806.3-201ENST00000638502 2704 ntBASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AL355974.1-201ENST00000618896 1708 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AL592429.1-201ENST00000403909 1473 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 RNA5SP172-201ENST00000365061 118 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 SET-203ENST00000372688 801 ntTSL 2 BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 Y_RNA.481-201ENST00000384373 102 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AL590635.1-201ENST00000406314 586 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 RNU6-1304P-201ENST00000411374 106 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 SEPT7P8-201ENST00000413308 775 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 RAD23BP1-201ENST00000421404 1227 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 ISCA1P6-201ENST00000427740 390 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 FTH1P10-202ENST00000430907 550 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms