Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PTPREP23469 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PTPREP23469 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PTPREP23469 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
PTPREP23469 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PTPREP23469 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PTPREP23469 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PTPREP23469 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC8.37□□□□□ -1.07
PTPREP23469 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
PTPREP23469 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
PTPREP23469 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
PTPREP23469 RNU6-1066P-201ENST00000363573 105 ntBASIC8.37□□□□□ -1.07
PTPREP23469 Y_RNA.158-201ENST00000363651 101 ntBASIC8.37□□□□□ -1.07
PTPREP23469 SNORA70.5-201ENST00000365519 135 ntBASIC8.37□□□□□ -1.07
PTPREP23469 SET-203ENST00000372688 801 ntTSL 2 BASIC8.37□□□□□ -1.07
PTPREP23469 CUBN-201ENST00000377823 705 ntTSL 3 BASIC8.37□□□□□ -1.07
PTPREP23469 MIR187-201ENST00000385062 109 ntBASIC8.37□□□□□ -1.07
PTPREP23469 SNORD115.1-201ENST00000391109 76 ntBASIC8.37□□□□□ -1.07
PTPREP23469 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PTPREP23469 RNU6ATAC23P-201ENST00000408448 123 ntBASIC8.37□□□□□ -1.07
PTPREP23469 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC8.37□□□□□ -1.07
PTPREP23469 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC8.37□□□□□ -1.07
PTPREP23469 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC8.37□□□□□ -1.07
PTPREP23469 BNIP3P2-201ENST00000441221 577 ntBASIC8.37□□□□□ -1.07
PTPREP23469 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC8.37□□□□□ -1.07
PTPREP23469 AC002486.2-201ENST00000447806 590 ntBASIC8.37□□□□□ -1.07
PTPREP23469 KF459542.1-201ENST00000450908 553 ntBASIC8.37□□□□□ -1.07
PTPREP23469 AC090638.1-201ENST00000498296 909 ntBASIC8.37□□□□□ -1.07
PTPREP23469 POU5F1P7-201ENST00000508759 541 ntBASIC8.37□□□□□ -1.07
PTPREP23469 SUMO2P7-201ENST00000511179 285 ntBASIC8.37□□□□□ -1.07
PTPREP23469 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC8.37□□□□□ -1.07
PTPREP23469 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
PTPREP23469 AC009902.1-201ENST00000519351 183 ntBASIC8.37□□□□□ -1.07
PTPREP23469 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC8.37□□□□□ -1.07
PTPREP23469 IGHVIII-25-1-201ENST00000522143 241 ntBASIC8.37□□□□□ -1.07
PTPREP23469 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC8.37□□□□□ -1.07
PTPREP23469 OR5D15P-201ENST00000531671 942 ntBASIC8.37□□□□□ -1.07
PTPREP23469 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC8.37□□□□□ -1.07
PTPREP23469 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC8.37□□□□□ -1.07
PTPREP23469 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC8.37□□□□□ -1.07
PTPREP23469 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC8.37□□□□□ -1.07
PTPREP23469 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC8.37□□□□□ -1.07
PTPREP23469 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC8.37□□□□□ -1.07
PTPREP23469 MIR544B-201ENST00000582372 78 ntBASIC8.37□□□□□ -1.07
PTPREP23469 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC8.37□□□□□ -1.07
PTPREP23469 AC073539.2-201ENST00000597113 165 ntBASIC8.37□□□□□ -1.07
PTPREP23469 AC009955.2-201ENST00000597288 542 ntBASIC8.37□□□□□ -1.07
PTPREP23469 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC8.37□□□□□ -1.07
PTPREP23469 AL008723.3-201ENST00000608926 449 ntBASIC8.37□□□□□ -1.07
PTPREP23469 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC8.37□□□□□ -1.07
PTPREP23469 TP53TG1_2.1-201ENST00000611226 182 ntBASIC8.37□□□□□ -1.07
PTPREP23469 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC8.37□□□□□ -1.07
PTPREP23469 AC026108.1-201ENST00000635444 547 ntBASIC8.37□□□□□ -1.07
PTPREP23469 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
PTPREP23469 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PTPREP23469 RIOK3P1-201ENST00000418778 1528 ntBASIC8.37□□□□□ -1.07
PTPREP23469 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PTPREP23469 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PTPREP23469 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
PTPREP23469 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PTPREP23469 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC8.37□□□□□ -1.07
PTPREP23469 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
PTPREP23469 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
PTPREP23469 AC006116.1-201ENST00000587908 2171 ntBASIC8.37□□□□□ -1.07
PTPREP23469 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC8.36□□□□□ -1.07
PTPREP23469 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
PTPREP23469 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC8.36□□□□□ -1.07
PTPREP23469 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTPREP23469 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC8.36□□□□□ -1.07
PTPREP23469 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTPREP23469 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTPREP23469 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
PTPREP23469 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTPREP23469 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC8.36□□□□□ -1.07
PTPREP23469 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTPREP23469 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
PTPREP23469 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTPREP23469 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PTPREP23469 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
PTPREP23469 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PTPREP23469 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTPREP23469 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTPREP23469 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC8.36□□□□□ -1.07
PTPREP23469 RNU6-456P-201ENST00000384493 107 ntBASIC8.36□□□□□ -1.07
PTPREP23469 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
PTPREP23469 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PTPREP23469 AL121834.1-202ENST00000404494 277 ntBASIC8.36□□□□□ -1.07
PTPREP23469 RNU4-14P-201ENST00000410858 122 ntBASIC8.36□□□□□ -1.07
PTPREP23469 RNU2-64P-201ENST00000411315 191 ntBASIC8.36□□□□□ -1.07
PTPREP23469 RNU6-1304P-201ENST00000411374 106 ntBASIC8.36□□□□□ -1.07
PTPREP23469 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC8.36□□□□□ -1.07
PTPREP23469 Z82198.3-201ENST00000421145 199 ntBASIC8.36□□□□□ -1.07
PTPREP23469 IGKV1OR9-1-201ENST00000424370 284 ntBASIC8.36□□□□□ -1.07
PTPREP23469 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTPREP23469 AL669831.1-202ENST00000428504 417 ntBASIC8.36□□□□□ -1.07
PTPREP23469 FTH1P16-201ENST00000435241 552 ntBASIC8.36□□□□□ -1.07
PTPREP23469 RPS3AP52-201ENST00000435639 297 ntBASIC8.36□□□□□ -1.07
PTPREP23469 AC009237.4-201ENST00000441078 238 ntBASIC8.36□□□□□ -1.07
PTPREP23469 MTCO1P42-201ENST00000457379 726 ntBASIC8.36□□□□□ -1.07
PTPREP23469 AC002075.1-201ENST00000457396 676 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms