Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AL592429.1-201ENST00000403909 1473 ntBASIC9.37□□□□□ -0.91
PHF8Q9UPP1 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 GNG5P1-201ENST00000255500 204 ntBASIC9.37□□□□□ -0.91
PHF8Q9UPP1 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 RNU6-216P-201ENST00000363282 104 ntBASIC9.37□□□□□ -0.91
PHF8Q9UPP1 Y_RNA.188-201ENST00000363952 111 ntBASIC9.37□□□□□ -0.91
PHF8Q9UPP1 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 Y_RNA.476-201ENST00000384347 108 ntBASIC9.37□□□□□ -0.91
PHF8Q9UPP1 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 NPM1P40-201ENST00000412758 733 ntBASIC9.37□□□□□ -0.91
PHF8Q9UPP1 RPL5P34-201ENST00000426545 891 ntBASIC9.37□□□□□ -0.91
PHF8Q9UPP1 AC073335.1-201ENST00000427776 363 ntBASIC9.37□□□□□ -0.91
PHF8Q9UPP1 LYPLA1P1-201ENST00000434514 622 ntBASIC9.37□□□□□ -0.91
PHF8Q9UPP1 RPL23AP16-201ENST00000441715 421 ntBASIC9.37□□□□□ -0.91
PHF8Q9UPP1 HBG2-204ENST00000444587 307 ntTSL 2 BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 UBBP5-201ENST00000446970 266 ntBASIC9.37□□□□□ -0.91
PHF8Q9UPP1 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 AC103563.5-201ENST00000455643 364 ntBASIC9.37□□□□□ -0.91
PHF8Q9UPP1 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 AC091849.1-201ENST00000509920 121 ntBASIC9.37□□□□□ -0.91
PHF8Q9UPP1 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 RNA5SP287-201ENST00000516358 103 ntBASIC9.37□□□□□ -0.91
PHF8Q9UPP1 MAL2-203ENST00000534619 578 ntTSL 4 BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 AL109766.1-201ENST00000555080 552 ntBASIC9.37□□□□□ -0.91
PHF8Q9UPP1 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 AC138915.2-201ENST00000569776 97 ntBASIC9.37□□□□□ -0.91
PHF8Q9UPP1 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 AL953862.2-201ENST00000603089 820 ntBASIC9.37□□□□□ -0.91
PHF8Q9UPP1 AL161734.1-201ENST00000609720 557 ntBASIC9.37□□□□□ -0.91
PHF8Q9UPP1 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 AC006058.1-201ENST00000568686 5067 ntBASIC9.37□□□□□ -0.91
PHF8Q9UPP1 CASC19-221ENST00000641309 1382 ntBASIC9.37□□□□□ -0.91
PHF8Q9UPP1 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 AP003486.1-201ENST00000525716 3994 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 FAM32BP-201ENST00000344033 333 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 Y_RNA.395-201ENST00000383945 109 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 U3.52-201ENST00000384034 216 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 SNORA11C-201ENST00000408532 129 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 ANKRD54P1-201ENST00000433115 471 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 OR52I1-201ENST00000450052 1050 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 CEACAMP4-201ENST00000457676 421 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 RN7SL552P-201ENST00000462094 276 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 RN7SL39P-201ENST00000462264 297 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 AC104849.1-201ENST00000462623 405 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 AC098799.3-201ENST00000506095 438 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 POU5F1P7-201ENST00000508759 541 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 LY96-202ENST00000518893 430 ntTSL 3 BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 AC013828.2-201ENST00000532487 235 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 SUB1P2-201ENST00000556401 297 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 AC090236.2-201ENST00000587933 1101 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 CKS1BP3-201ENST00000600888 237 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 AL589743.6-201ENST00000611025 117 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 AC234782.5-201ENST00000617723 324 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 DLEU1_2.1-201ENST00000617920 342 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 U4.1-201ENST00000620349 87 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 RBPJP7-201ENST00000442803 1447 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 RBPJP5-201ENST00000449433 1447 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 MFSD8-218ENST00000641186 4448 ntBASIC9.36□□□□□ -0.91
PHF8Q9UPP1 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PHF8Q9UPP1 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms