Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 E2F6P2-201ENST00000420708 748 ntBASIC6□□□□□ -1.45
SHANK3Q9BYB0 GCA-203ENST00000429691 824 ntTSL 3 BASIC6□□□□□ -1.45
SHANK3Q9BYB0 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC6□□□□□ -1.45
SHANK3Q9BYB0 Y_RNA.719-201ENST00000517156 106 ntBASIC6□□□□□ -1.45
SHANK3Q9BYB0 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6□□□□□ -1.45
SHANK3Q9BYB0 OR8R1P-201ENST00000543943 764 ntBASIC6□□□□□ -1.45
SHANK3Q9BYB0 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC6□□□□□ -1.45
SHANK3Q9BYB0 AL121890.2-201ENST00000617644 465 ntBASIC6□□□□□ -1.45
SHANK3Q9BYB0 BX005214.3-202ENST00000619809 325 ntBASIC6□□□□□ -1.45
SHANK3Q9BYB0 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6□□□□□ -1.45
SHANK3Q9BYB0 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHANK3Q9BYB0 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHANK3Q9BYB0 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHANK3Q9BYB0 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6□□□□□ -1.45
SHANK3Q9BYB0 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6□□□□□ -1.45
SHANK3Q9BYB0 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
SHANK3Q9BYB0 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 AC069157.1-201ENST00000421749 137 ntBASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 RPL37P1-201ENST00000432310 284 ntBASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 AC090142.1-201ENST00000465776 462 ntBASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 AC025884.1-201ENST00000556034 378 ntBASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 AL021877.2-201ENST00000624442 10684 ntBASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 SPRR2C-201ENST00000290702 219 ntBASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 RPL7P58-201ENST00000402913 758 ntBASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 CKS1BP6-201ENST00000424932 240 ntBASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 AC092162.1-201ENST00000432828 434 ntBASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 ABCC13-202ENST00000463099 3842 ntBASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 PGBD4P4-201ENST00000509673 613 ntBASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 AC140479.6-201ENST00000633535 357 ntBASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 AL033543.1-201ENST00000623440 13454 ntBASIC5.99□□□□□ -1.45
SHANK3Q9BYB0 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHANK3Q9BYB0 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHANK3Q9BYB0 AC092376.2-201ENST00000622621 4116 ntBASIC5.98□□□□□ -1.45
SHANK3Q9BYB0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
SHANK3Q9BYB0 CPHL1P-201ENST00000461341 3407 ntBASIC5.98□□□□□ -1.45
SHANK3Q9BYB0 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SHANK3Q9BYB0 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
SHANK3Q9BYB0 RPL23AP26-201ENST00000412728 464 ntBASIC5.98□□□□□ -1.45
SHANK3Q9BYB0 AC093578.1-201ENST00000415219 368 ntBASIC5.98□□□□□ -1.45
SHANK3Q9BYB0 YME1L1P1-201ENST00000429435 297 ntBASIC5.98□□□□□ -1.45
SHANK3Q9BYB0 NDUFA5P1-201ENST00000433858 341 ntBASIC5.98□□□□□ -1.45
SHANK3Q9BYB0 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.98□□□□□ -1.45
SHANK3Q9BYB0 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.98□□□□□ -1.45
SHANK3Q9BYB0 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.98□□□□□ -1.45
SHANK3Q9BYB0 AC119751.5-201ENST00000514077 770 ntBASIC5.98□□□□□ -1.45
SHANK3Q9BYB0 AC012468.1-201ENST00000604888 430 ntBASIC5.98□□□□□ -1.45
SHANK3Q9BYB0 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.98□□□□□ -1.45
SHANK3Q9BYB0 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SHANK3Q9BYB0 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
SHANK3Q9BYB0 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.98□□□□□ -1.45
SHANK3Q9BYB0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHANK3Q9BYB0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 AL137918.1-201ENST00000624542 1922 ntBASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 TMBIM7P-201ENST00000418074 855 ntBASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 RPL23AP52-201ENST00000439311 478 ntBASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 RPL5P12-201ENST00000477071 851 ntBASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 CYCSP40-201ENST00000575927 294 ntBASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 OR2L1P-202ENST00000641567 1023 ntBASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.97□□□□□ -1.45
SHANK3Q9BYB0 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms