Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
HOXA2O43364 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
HOXA2O43364 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
HOXA2O43364 AC007996.1-201ENST00000620414 2821 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HOXA2O43364 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
HOXA2O43364 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.72□□□□□ -1.17
HOXA2O43364 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
HOXA2O43364 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HOXA2O43364 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.72□□□□□ -1.17
HOXA2O43364 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HOXA2O43364 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.72□□□□□ -1.17
HOXA2O43364 MIR369-201ENST00000362155 70 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
HOXA2O43364 RNU6-1055P-201ENST00000391085 107 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 AC245036.1-201ENST00000391727 309 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 AC068050.1-201ENST00000394891 380 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 SUMO2P13-201ENST00000403109 272 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 RN7SKP240-201ENST00000410583 375 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HOXA2O43364 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.72□□□□□ -1.17
HOXA2O43364 AKR1B10P1-201ENST00000425765 942 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 RPL23AP4-201ENST00000427757 463 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC7.72□□□□□ -1.17
HOXA2O43364 HMGB1P18-201ENST00000438801 619 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 AC016691.1-201ENST00000441321 413 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 KF459542.1-201ENST00000450908 553 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 MTCO2P29-201ENST00000465212 189 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 SNORA40.12-201ENST00000516329 111 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 IGLC4-201ENST00000517690 248 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 AC022861.1-201ENST00000522981 663 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.72□□□□□ -1.17
HOXA2O43364 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.72□□□□□ -1.17
HOXA2O43364 PDCD5P1-201ENST00000543528 309 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HOXA2O43364 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC7.72□□□□□ -1.17
HOXA2O43364 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC7.72□□□□□ -1.17
HOXA2O43364 AC019322.1-201ENST00000571869 389 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.72□□□□□ -1.17
HOXA2O43364 AC100830.2-201ENST00000581636 240 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 MIR4428-201ENST00000584884 73 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC7.72□□□□□ -1.17
HOXA2O43364 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC7.72□□□□□ -1.17
HOXA2O43364 AC016925.2-201ENST00000605108 242 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 AL355472.4-201ENST00000610233 626 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 RN7SL126P-201ENST00000616400 299 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 AC233309.1-201ENST00000619522 751 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC7.72□□□□□ -1.17
HOXA2O43364 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC7.72□□□□□ -1.17
HOXA2O43364 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.72□□□□□ -1.17
HOXA2O43364 AC122713.2-201ENST00000624942 3335 ntBASIC7.72□□□□□ -1.17
HOXA2O43364 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HOXA2O43364 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HOXA2O43364 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HOXA2O43364 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HOXA2O43364 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HOXA2O43364 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HOXA2O43364 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HOXA2O43364 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
HOXA2O43364 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.72□□□□□ -1.17
HOXA2O43364 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HOXA2O43364 MTND4P14-201ENST00000435799 1354 ntBASIC7.71□□□□□ -1.17
HOXA2O43364 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
HOXA2O43364 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
HOXA2O43364 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC7.71□□□□□ -1.17
HOXA2O43364 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
HOXA2O43364 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.17
HOXA2O43364 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
HOXA2O43364 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
HOXA2O43364 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
HOXA2O43364 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
HOXA2O43364 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
HOXA2O43364 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.71□□□□□ -1.17
HOXA2O43364 AC145138.1-201ENST00000512908 2851 ntBASIC7.71□□□□□ -1.17
HOXA2O43364 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
HOXA2O43364 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.71□□□□□ -1.18
HOXA2O43364 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
HOXA2O43364 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
HOXA2O43364 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HOXA2O43364 RNU6-639P-201ENST00000384074 107 ntBASIC7.71□□□□□ -1.18
HOXA2O43364 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HOXA2O43364 RPL23AP32-201ENST00000395315 459 ntBASIC7.71□□□□□ -1.18
HOXA2O43364 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC7.71□□□□□ -1.18
HOXA2O43364 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC7.71□□□□□ -1.18
HOXA2O43364 AL596448.1-201ENST00000415024 392 ntBASIC7.71□□□□□ -1.18
HOXA2O43364 MTCO2P27-201ENST00000420740 428 ntBASIC7.71□□□□□ -1.18
HOXA2O43364 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC7.71□□□□□ -1.18
HOXA2O43364 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC7.71□□□□□ -1.18
HOXA2O43364 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
HOXA2O43364 ANKRD54P1-201ENST00000433115 471 ntBASIC7.71□□□□□ -1.18
HOXA2O43364 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC7.71□□□□□ -1.18
HOXA2O43364 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.71□□□□□ -1.18
HOXA2O43364 AL627308.1-201ENST00000435693 821 ntBASIC7.71□□□□□ -1.18
HOXA2O43364 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC7.71□□□□□ -1.18
HOXA2O43364 YRDCP3-201ENST00000456507 480 ntBASIC7.71□□□□□ -1.18
HOXA2O43364 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HOXA2O43364 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC7.71□□□□□ -1.18
HOXA2O43364 AL163540.1-201ENST00000485382 386 ntBASIC7.71□□□□□ -1.18
HOXA2O43364 RPS3AP50-201ENST00000487064 803 ntBASIC7.71□□□□□ -1.18
HOXA2O43364 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms