Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 OFD1P5Y-201ENST00000447585 2590 ntBASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 AL049634.1-201ENST00000453770 1720 ntBASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 MIPOL1-211ENST00000556451 2282 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 U3.14-201ENST00000365363 227 ntBASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 RPS10P2-201ENST00000430953 494 ntBASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 MTATP6P16-201ENST00000434543 526 ntBASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 AC079922.1-201ENST00000443291 359 ntBASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 AL118520.1-201ENST00000450770 291 ntBASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 AC004801.2-202ENST00000463559 283 ntBASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 AL049830.2-201ENST00000480072 201 ntBASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 EIF3KP1-201ENST00000513279 656 ntBASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 IGLV7-35-201ENST00000523314 340 ntBASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 RPA2P1-201ENST00000556557 721 ntBASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 RN7SL376P-201ENST00000578594 264 ntBASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 HIGD1B-205ENST00000591513 547 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 ATF7IP-221ENST00000543189 4887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SCAF1Q9H7N4 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 HIPK1-208ENST00000426820 4112 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 Z95327.2-201ENST00000414579 1873 ntBASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 ZKSCAN5-203ENST00000451158 3111 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 AC105342.1-201ENST00000378334 6848 ntBASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 APP-209ENST00000440126 2846 ntTSL 2 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 AC009237.3-203ENST00000442128 3551 ntBASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 INTS6-215ENST00000490542 2307 ntTSL 5 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 AC007920.2-201ENST00000636210 1973 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 ARHGAP42P5-201ENST00000548856 2936 ntBASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 CASC19-260ENST00000641828 2001 ntBASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 AL139276.1-201ENST00000311910 1001 ntBASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 IGKV7-3-201ENST00000357453 298 ntBASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 Y_RNA.126-201ENST00000363382 111 ntBASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 RN7SKP162-201ENST00000363605 345 ntBASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 SNORA62.1-201ENST00000364287 154 ntBASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 SNORA73A-201ENST00000364938 206 ntBASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 AP000580.1-201ENST00000404439 358 ntBASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 CTBP2P1-201ENST00000431853 245 ntBASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 AC105393.1-202ENST00000449621 598 ntTSL 3 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 AC022415.1-202ENST00000486612 523 ntBASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 AP000648.1-201ENST00000529682 397 ntBASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 REG4-204ENST00000530654 612 ntTSL 5 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 AC011474.3-201ENST00000587520 250 ntTSL 5 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 AC092747.3-201ENST00000603769 301 ntBASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 BNIP3P15-201ENST00000604600 301 ntBASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 TRIM37-214ENST00000625984 204 ntTSL 5 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 METTL15-204ENST00000407364 4242 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SCAF1Q9H7N4 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SCAF1Q9H7N4 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCAF1Q9H7N4 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCAF1Q9H7N4 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCAF1Q9H7N4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SCAF1Q9H7N4 SCOC-AS1-201ENST00000512692 1987 ntTSL 2 BASIC12.08□□□□□ -0.48
SCAF1Q9H7N4 AC011379.1-201ENST00000508713 3025 ntBASIC12.08□□□□□ -0.48
SCAF1Q9H7N4 AC090017.1-201ENST00000548612 1779 ntBASIC12.08□□□□□ -0.48
SCAF1Q9H7N4 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCAF1Q9H7N4 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms