Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 RRM2P4-201ENST00000441721 562 ntBASIC6.02□□□□□ -1.45
COL18A1P39060 RN7SL542P-201ENST00000467147 294 ntBASIC6.02□□□□□ -1.45
COL18A1P39060 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL18A1P39060 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.02□□□□□ -1.45
COL18A1P39060 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC6.02□□□□□ -1.45
COL18A1P39060 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.02□□□□□ -1.45
COL18A1P39060 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.02□□□□□ -1.45
COL18A1P39060 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC6.02□□□□□ -1.45
COL18A1P39060 MIR6867-201ENST00000610636 67 ntBASIC6.02□□□□□ -1.45
COL18A1P39060 AC112200.1-201ENST00000625015 234 ntBASIC6.02□□□□□ -1.45
COL18A1P39060 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL18A1P39060 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL18A1P39060 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL18A1P39060 AC108467.2-201ENST00000617640 1597 ntBASIC6.02□□□□□ -1.45
COL18A1P39060 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL18A1P39060 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL18A1P39060 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL18A1P39060 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL18A1P39060 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
COL18A1P39060 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
COL18A1P39060 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
COL18A1P39060 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC6.01□□□□□ -1.45
COL18A1P39060 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL18A1P39060 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.01□□□□□ -1.45
COL18A1P39060 UBBP2-201ENST00000376781 231 ntBASIC6.01□□□□□ -1.45
COL18A1P39060 RNU11-201ENST00000387069 134 ntBASIC6.01□□□□□ -1.45
COL18A1P39060 AC007738.1-201ENST00000413892 348 ntBASIC6.01□□□□□ -1.45
COL18A1P39060 RPL35P6-201ENST00000490024 372 ntBASIC6.01□□□□□ -1.45
COL18A1P39060 PGBD4P4-201ENST00000509673 613 ntBASIC6.01□□□□□ -1.45
COL18A1P39060 AC008958.1-201ENST00000511047 682 ntBASIC6.01□□□□□ -1.45
COL18A1P39060 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC6.01□□□□□ -1.45
COL18A1P39060 RN7SL600P-201ENST00000581811 299 ntBASIC6.01□□□□□ -1.45
COL18A1P39060 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.01□□□□□ -1.45
COL18A1P39060 AL360012.1-201ENST00000602813 131 ntBASIC6.01□□□□□ -1.45
COL18A1P39060 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC6.01□□□□□ -1.45
COL18A1P39060 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL18A1P39060 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
COL18A1P39060 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL18A1P39060 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
COL18A1P39060 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
COL18A1P39060 RNU1-132P-201ENST00000364300 164 ntBASIC6.01□□□□□ -1.45
COL18A1P39060 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
COL18A1P39060 EIF4A1P3-201ENST00000411521 244 ntBASIC6.01□□□□□ -1.45
COL18A1P39060 CYCSP19-201ENST00000411715 316 ntBASIC6.01□□□□□ -1.45
COL18A1P39060 AC013429.2-201ENST00000418798 781 ntBASIC6.01□□□□□ -1.45
COL18A1P39060 AC011998.1-201ENST00000433403 117 ntBASIC6.01□□□□□ -1.45
COL18A1P39060 RHEBP2-201ENST00000450289 600 ntBASIC6.01□□□□□ -1.45
COL18A1P39060 AL935212.3-201ENST00000450729 284 ntBASIC6.01□□□□□ -1.45
COL18A1P39060 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC6.01□□□□□ -1.45
COL18A1P39060 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.01□□□□□ -1.45
COL18A1P39060 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
COL18A1P39060 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.01□□□□□ -1.45
COL18A1P39060 AC006116.5-201ENST00000591936 559 ntBASIC6.01□□□□□ -1.45
COL18A1P39060 AL139254.3-201ENST00000641097 674 ntBASIC6.01□□□□□ -1.45
COL18A1P39060 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6□□□□□ -1.45
COL18A1P39060 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL18A1P39060 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
COL18A1P39060 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
COL18A1P39060 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL18A1P39060 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL18A1P39060 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
COL18A1P39060 RN7SKP33-201ENST00000410942 340 ntBASIC6□□□□□ -1.45
COL18A1P39060 EIF4HP2-201ENST00000424380 563 ntBASIC6□□□□□ -1.45
COL18A1P39060 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6□□□□□ -1.45
COL18A1P39060 RPL7P33-201ENST00000444159 742 ntBASIC6□□□□□ -1.45
COL18A1P39060 AC098799.3-201ENST00000506095 438 ntBASIC6□□□□□ -1.45
COL18A1P39060 SAP18P1-201ENST00000512058 390 ntBASIC6□□□□□ -1.45
COL18A1P39060 AC108064.1-201ENST00000513791 460 ntBASIC6□□□□□ -1.45
COL18A1P39060 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC6□□□□□ -1.45
COL18A1P39060 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6□□□□□ -1.45
COL18A1P39060 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC6□□□□□ -1.45
COL18A1P39060 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6□□□□□ -1.45
COL18A1P39060 AL354984.3-201ENST00000604803 325 ntBASIC6□□□□□ -1.45
COL18A1P39060 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6□□□□□ -1.45
COL18A1P39060 AC005899.7-201ENST00000618199 588 ntBASIC6□□□□□ -1.45
COL18A1P39060 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
COL18A1P39060 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL18A1P39060 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL18A1P39060 AC079777.1-201ENST00000623836 1953 ntBASIC6□□□□□ -1.45
COL18A1P39060 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL18A1P39060 ADAM5-202ENST00000399789 1942 ntBASIC5.99□□□□□ -1.45
COL18A1P39060 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL18A1P39060 MIR331-201ENST00000362302 94 ntBASIC5.99□□□□□ -1.45
COL18A1P39060 RNA5SP283-201ENST00000365604 119 ntBASIC5.99□□□□□ -1.45
COL18A1P39060 AC079809.1-201ENST00000415468 276 ntBASIC5.99□□□□□ -1.45
COL18A1P39060 RPL21P89-201ENST00000444021 467 ntBASIC5.99□□□□□ -1.45
COL18A1P39060 TPT1P3-201ENST00000492841 512 ntBASIC5.99□□□□□ -1.45
COL18A1P39060 NDUFB4P12-201ENST00000513465 390 ntBASIC5.99□□□□□ -1.45
COL18A1P39060 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.99□□□□□ -1.45
COL18A1P39060 OR8G7P-201ENST00000616658 848 ntBASIC5.99□□□□□ -1.45
COL18A1P39060 AP000648.2-201ENST00000624182 404 ntBASIC5.99□□□□□ -1.45
COL18A1P39060 AC006065.6-201ENST00000625201 545 ntBASIC5.99□□□□□ -1.45
COL18A1P39060 MIR3653-201ENST00000625572 110 ntBASIC5.99□□□□□ -1.45
COL18A1P39060 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL18A1P39060 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL18A1P39060 AL445487.1-201ENST00000415694 1580 ntBASIC5.99□□□□□ -1.45
COL18A1P39060 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL18A1P39060 AC022417.1-201ENST00000624768 1303 ntBASIC5.99□□□□□ -1.45
COL18A1P39060 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.99□□□□□ -1.45
COL18A1P39060 AL161912.2-201ENST00000565707 3007 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms