Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 AC113410.3-201ENST00000623366 203 ntBASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
DNMT3AQ9Y6K1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.12■□□□□ 0.65
DNMT3AQ9Y6K1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DNMT3AQ9Y6K1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
DNMT3AQ9Y6K1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.12■□□□□ 0.65
DNMT3AQ9Y6K1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.12■□□□□ 0.65
DNMT3AQ9Y6K1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DNMT3AQ9Y6K1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
DNMT3AQ9Y6K1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.12■□□□□ 0.65
DNMT3AQ9Y6K1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.12■□□□□ 0.65
DNMT3AQ9Y6K1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.12■□□□□ 0.65
DNMT3AQ9Y6K1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
DNMT3AQ9Y6K1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DNMT3AQ9Y6K1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
DNMT3AQ9Y6K1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.12■□□□□ 0.65
DNMT3AQ9Y6K1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.12■□□□□ 0.65
DNMT3AQ9Y6K1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.12■□□□□ 0.65
DNMT3AQ9Y6K1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.12■□□□□ 0.65
DNMT3AQ9Y6K1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
DNMT3AQ9Y6K1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DNMT3AQ9Y6K1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
DNMT3AQ9Y6K1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
DNMT3AQ9Y6K1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 KRT16P1-201ENST00000399124 1418 ntBASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 MIR4497-201ENST00000583208 89 ntBASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 CD177P1-201ENST00000606252 935 ntBASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.11■□□□□ 0.65
DNMT3AQ9Y6K1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 KRT17P2-201ENST00000300992 1314 ntBASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 AC131212.4-201ENST00000623606 975 ntBASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 HLA-A-209ENST00000638375 975 ntBASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
DNMT3AQ9Y6K1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms