Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.12■□□□□ 0.81
HS3ST4Q9Y661 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HS3ST4Q9Y661 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HS3ST4Q9Y661 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
HS3ST4Q9Y661 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.12■□□□□ 0.81
HS3ST4Q9Y661 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HS3ST4Q9Y661 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.12■□□□□ 0.81
HS3ST4Q9Y661 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.12■□□□□ 0.81
HS3ST4Q9Y661 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.12■□□□□ 0.81
HS3ST4Q9Y661 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.12■□□□□ 0.81
HS3ST4Q9Y661 HLA-A-209ENST00000638375 975 ntBASIC20.12■□□□□ 0.81
HS3ST4Q9Y661 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.12■□□□□ 0.81
HS3ST4Q9Y661 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HS3ST4Q9Y661 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.12■□□□□ 0.81
HS3ST4Q9Y661 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HS3ST4Q9Y661 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HS3ST4Q9Y661 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HS3ST4Q9Y661 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HS3ST4Q9Y661 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
HS3ST4Q9Y661 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.11■□□□□ 0.81
HS3ST4Q9Y661 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.11■□□□□ 0.81
HS3ST4Q9Y661 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HS3ST4Q9Y661 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HS3ST4Q9Y661 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HS3ST4Q9Y661 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
HS3ST4Q9Y661 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HS3ST4Q9Y661 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.11■□□□□ 0.81
HS3ST4Q9Y661 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HS3ST4Q9Y661 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.11■□□□□ 0.81
HS3ST4Q9Y661 AC073195.1-201ENST00000607241 877 ntBASIC20.11■□□□□ 0.81
HS3ST4Q9Y661 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HS3ST4Q9Y661 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HS3ST4Q9Y661 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
HS3ST4Q9Y661 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.11■□□□□ 0.81
HS3ST4Q9Y661 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HS3ST4Q9Y661 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.11■□□□□ 0.81
HS3ST4Q9Y661 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 AP001412.1-201ENST00000608405 714 ntBASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 AL158211.5-201ENST00000623583 2518 ntBASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
HS3ST4Q9Y661 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HS3ST4Q9Y661 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HS3ST4Q9Y661 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HS3ST4Q9Y661 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HS3ST4Q9Y661 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HS3ST4Q9Y661 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HS3ST4Q9Y661 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.09■□□□□ 0.81
HS3ST4Q9Y661 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HS3ST4Q9Y661 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HS3ST4Q9Y661 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.09■□□□□ 0.81
HS3ST4Q9Y661 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.09■□□□□ 0.81
HS3ST4Q9Y661 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
HS3ST4Q9Y661 FAM197Y1-201ENST00000421178 764 ntBASIC20.09■□□□□ 0.81
HS3ST4Q9Y661 KSR1P1-201ENST00000446298 240 ntBASIC20.09■□□□□ 0.81
HS3ST4Q9Y661 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.09■□□□□ 0.81
HS3ST4Q9Y661 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HS3ST4Q9Y661 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HS3ST4Q9Y661 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HS3ST4Q9Y661 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HS3ST4Q9Y661 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.09■□□□□ 0.81
HS3ST4Q9Y661 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HS3ST4Q9Y661 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HS3ST4Q9Y661 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.08■□□□□ 0.81
HS3ST4Q9Y661 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HS3ST4Q9Y661 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.08■□□□□ 0.81
HS3ST4Q9Y661 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.08■□□□□ 0.81
HS3ST4Q9Y661 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HS3ST4Q9Y661 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
HS3ST4Q9Y661 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
HS3ST4Q9Y661 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HS3ST4Q9Y661 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HS3ST4Q9Y661 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
HS3ST4Q9Y661 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HS3ST4Q9Y661 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HS3ST4Q9Y661 AL596275.1-201ENST00000423464 877 ntBASIC20.08■□□□□ 0.81
HS3ST4Q9Y661 SNORA78-201ENST00000459373 127 ntBASIC20.08■□□□□ 0.81
HS3ST4Q9Y661 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.08■□□□□ 0.81
HS3ST4Q9Y661 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.08■□□□□ 0.81
HS3ST4Q9Y661 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.08■□□□□ 0.81
HS3ST4Q9Y661 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HS3ST4Q9Y661 CD177P1-201ENST00000606252 935 ntBASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms