Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 AL161938.1-201ENST00000569833 2180 ntBASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 pRNA.6-201ENST00000610482 90 ntBASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 pRNA.5-201ENST00000612139 90 ntBASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 pRNA.11-201ENST00000618423 90 ntBASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 pRNA.13-201ENST00000619112 90 ntBASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 ABHD17AP4-201ENST00000411545 909 ntBASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 OR2I1P-207ENST00000453522 948 ntBASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 AC241377.3-202ENST00000626088 1088 ntBASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 AC241585.3-202ENST00000628937 1088 ntBASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 AC245100.8-202ENST00000629247 1058 ntBASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAPPC1Q9Y5R8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
TRAPPC1Q9Y5R8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAPPC1Q9Y5R8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAPPC1Q9Y5R8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAPPC1Q9Y5R8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC14.77□□□□□ -0.05
TRAPPC1Q9Y5R8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAPPC1Q9Y5R8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAPPC1Q9Y5R8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAPPC1Q9Y5R8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAPPC1Q9Y5R8 AC124067.4-201ENST00000519691 2379 ntBASIC14.77□□□□□ -0.05
TRAPPC1Q9Y5R8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAPPC1Q9Y5R8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAPPC1Q9Y5R8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAPPC1Q9Y5R8 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TRAPPC1Q9Y5R8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAPPC1Q9Y5R8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAPPC1Q9Y5R8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAPPC1Q9Y5R8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC1Q9Y5R8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAPPC1Q9Y5R8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC1Q9Y5R8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAPPC1Q9Y5R8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC1Q9Y5R8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC1Q9Y5R8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC1Q9Y5R8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAPPC1Q9Y5R8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC1Q9Y5R8 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC1Q9Y5R8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC1Q9Y5R8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC1Q9Y5R8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms