Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 AC133681.1-201ENST00000465482 601 ntBASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 AL031963.3-201ENST00000606441 850 ntBASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 AL023875.1-201ENST00000640777 796 ntBASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.66
PCDHGA4Q9Y5G9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA4Q9Y5G9 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.2■□□□□ 0.66
PCDHGA4Q9Y5G9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PCDHGA4Q9Y5G9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGA4Q9Y5G9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PCDHGA4Q9Y5G9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGA4Q9Y5G9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA4Q9Y5G9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.2■□□□□ 0.66
PCDHGA4Q9Y5G9 MIR4785-201ENST00000585005 73 ntBASIC19.2■□□□□ 0.66
PCDHGA4Q9Y5G9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGA4Q9Y5G9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGA4Q9Y5G9 AC133561.5-201ENST00000635547 218 ntBASIC19.2■□□□□ 0.66
PCDHGA4Q9Y5G9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA4Q9Y5G9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGA4Q9Y5G9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGA4Q9Y5G9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA4Q9Y5G9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGA4Q9Y5G9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGA4Q9Y5G9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGA4Q9Y5G9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGA4Q9Y5G9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA4Q9Y5G9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDHGA4Q9Y5G9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA4Q9Y5G9 AL135905.2-201ENST00000584934 1404 ntBASIC19.19■□□□□ 0.66
PCDHGA4Q9Y5G9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA4Q9Y5G9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA4Q9Y5G9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA4Q9Y5G9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGA4Q9Y5G9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PCDHGA4Q9Y5G9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA4Q9Y5G9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDHGA4Q9Y5G9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA4Q9Y5G9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGA4Q9Y5G9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGA4Q9Y5G9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDHGA4Q9Y5G9 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGA4Q9Y5G9 AC005082.1-201ENST00000413042 2259 ntBASIC19.19■□□□□ 0.66
PCDHGA4Q9Y5G9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA4Q9Y5G9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGA4Q9Y5G9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGA4Q9Y5G9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PCDHGA4Q9Y5G9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGA4Q9Y5G9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 KRT8P20-201ENST00000423953 1409 ntBASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 KRT8P17-201ENST00000453110 1448 ntBASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 AC005829.2-201ENST00000571422 1056 ntBASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PCDHGA4Q9Y5G9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms