Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 AC233702.5-201ENST00000584107 538 ntBASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB6Q9Y5F9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB6Q9Y5F9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCDHGB6Q9Y5F9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB6Q9Y5F9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB6Q9Y5F9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB6Q9Y5F9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB6Q9Y5F9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
PCDHGB6Q9Y5F9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB6Q9Y5F9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHGB6Q9Y5F9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB6Q9Y5F9 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHGB6Q9Y5F9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGB6Q9Y5F9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.41■□□□□ 0.54
PCDHGB6Q9Y5F9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PCDHGB6Q9Y5F9 AL121829.2-201ENST00000620908 328 ntBASIC18.41■□□□□ 0.54
PCDHGB6Q9Y5F9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB6Q9Y5F9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGB6Q9Y5F9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB6Q9Y5F9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB6Q9Y5F9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB6Q9Y5F9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 PRKY-204ENST00000533551 1019 ntBASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 AL023875.1-201ENST00000640777 796 ntBASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHGB6Q9Y5F9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHGB6Q9Y5F9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHGB6Q9Y5F9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB6Q9Y5F9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB6Q9Y5F9 TNXA-203ENST00000507684 2038 ntBASIC18.39■□□□□ 0.53
PCDHGB6Q9Y5F9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB6Q9Y5F9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB6Q9Y5F9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB6Q9Y5F9 RPS2P55-201ENST00000397318 883 ntBASIC18.39■□□□□ 0.53
PCDHGB6Q9Y5F9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.39■□□□□ 0.53
PCDHGB6Q9Y5F9 AC107956.1-201ENST00000494359 873 ntBASIC18.39■□□□□ 0.53
PCDHGB6Q9Y5F9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGB6Q9Y5F9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB6Q9Y5F9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PCDHGB6Q9Y5F9 AL162377.1-201ENST00000618844 1793 ntBASIC18.39■□□□□ 0.53
PCDHGB6Q9Y5F9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PCDHGB6Q9Y5F9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB6Q9Y5F9 AP000974.1-201ENST00000623909 2387 ntBASIC18.39■□□□□ 0.53
PCDHGB6Q9Y5F9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PCDHGB6Q9Y5F9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHGB6Q9Y5F9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGB6Q9Y5F9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB6Q9Y5F9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB6Q9Y5F9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB6Q9Y5F9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB6Q9Y5F9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGB6Q9Y5F9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB6Q9Y5F9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB6Q9Y5F9 LETM1P2-201ENST00000597330 2178 ntBASIC18.38■□□□□ 0.53
PCDHGB6Q9Y5F9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB6Q9Y5F9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGB6Q9Y5F9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms