Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF6Q9Y252 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.33■□□□□ 0.52
RNF6Q9Y252 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.33■□□□□ 0.52
RNF6Q9Y252 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF6Q9Y252 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.33■□□□□ 0.52
RNF6Q9Y252 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF6Q9Y252 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF6Q9Y252 AL359736.2-201ENST00000621992 437 ntBASIC18.33■□□□□ 0.52
RNF6Q9Y252 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF6Q9Y252 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF6Q9Y252 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF6Q9Y252 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF6Q9Y252 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF6Q9Y252 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF6Q9Y252 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF6Q9Y252 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF6Q9Y252 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF6Q9Y252 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF6Q9Y252 AC093503.3-201ENST00000624917 2352 ntBASIC18.32■□□□□ 0.52
RNF6Q9Y252 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF6Q9Y252 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF6Q9Y252 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF6Q9Y252 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RNF6Q9Y252 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF6Q9Y252 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF6Q9Y252 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF6Q9Y252 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF6Q9Y252 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF6Q9Y252 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RNF6Q9Y252 UBE2SP1-201ENST00000450587 669 ntBASIC18.32■□□□□ 0.52
RNF6Q9Y252 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF6Q9Y252 PNMA6B-201ENST00000538162 1200 ntBASIC18.32■□□□□ 0.52
RNF6Q9Y252 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.32■□□□□ 0.52
RNF6Q9Y252 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF6Q9Y252 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF6Q9Y252 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
RNF6Q9Y252 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF6Q9Y252 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF6Q9Y252 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF6Q9Y252 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
RNF6Q9Y252 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF6Q9Y252 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.32■□□□□ 0.52
RNF6Q9Y252 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF6Q9Y252 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RNF6Q9Y252 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF6Q9Y252 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF6Q9Y252 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF6Q9Y252 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF6Q9Y252 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RNF6Q9Y252 Z82202.1-201ENST00000623446 1880 ntBASIC18.31■□□□□ 0.52
RNF6Q9Y252 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF6Q9Y252 AC092368.3-202ENST00000574180 1591 ntBASIC18.31■□□□□ 0.52
RNF6Q9Y252 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RNF6Q9Y252 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF6Q9Y252 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF6Q9Y252 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RNF6Q9Y252 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RNF6Q9Y252 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF6Q9Y252 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF6Q9Y252 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF6Q9Y252 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RNF6Q9Y252 AC008550.1-201ENST00000511500 884 ntBASIC18.31■□□□□ 0.52
RNF6Q9Y252 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.31■□□□□ 0.52
RNF6Q9Y252 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.31■□□□□ 0.52
RNF6Q9Y252 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RNF6Q9Y252 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF6Q9Y252 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RNF6Q9Y252 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF6Q9Y252 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF6Q9Y252 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RNF6Q9Y252 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
RNF6Q9Y252 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF6Q9Y252 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
RNF6Q9Y252 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF6Q9Y252 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF6Q9Y252 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF6Q9Y252 AC116050.2-201ENST00000612102 1779 ntBASIC18.3■□□□□ 0.52
RNF6Q9Y252 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF6Q9Y252 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
RNF6Q9Y252 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF6Q9Y252 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF6Q9Y252 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
RNF6Q9Y252 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF6Q9Y252 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF6Q9Y252 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF6Q9Y252 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF6Q9Y252 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF6Q9Y252 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF6Q9Y252 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RNF6Q9Y252 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF6Q9Y252 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF6Q9Y252 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF6Q9Y252 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF6Q9Y252 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF6Q9Y252 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF6Q9Y252 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RNF6Q9Y252 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF6Q9Y252 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF6Q9Y252 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF6Q9Y252 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms