Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 AC020916.1-201ENST00000587762 1774 ntBASIC17.1■□□□□ 0.33
DUX4Q9UBX2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.1■□□□□ 0.33
DUX4Q9UBX2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.1■□□□□ 0.33
DUX4Q9UBX2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUX4Q9UBX2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
DUX4Q9UBX2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUX4Q9UBX2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.1■□□□□ 0.33
DUX4Q9UBX2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.1■□□□□ 0.33
DUX4Q9UBX2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DUX4Q9UBX2 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.1■□□□□ 0.33
DUX4Q9UBX2 NCF1B-203ENST00000435988 1254 ntBASIC17.1■□□□□ 0.33
DUX4Q9UBX2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUX4Q9UBX2 GUSBP6-202ENST00000438529 1198 ntBASIC17.1■□□□□ 0.33
DUX4Q9UBX2 AC083906.2-201ENST00000511578 360 ntBASIC17.1■□□□□ 0.33
DUX4Q9UBX2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.1■□□□□ 0.33
DUX4Q9UBX2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUX4Q9UBX2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUX4Q9UBX2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DUX4Q9UBX2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.1■□□□□ 0.33
DUX4Q9UBX2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DUX4Q9UBX2 FP700111.2-201ENST00000619190 1892 ntBASIC17.1■□□□□ 0.33
DUX4Q9UBX2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 AF201337.1-201ENST00000520239 748 ntBASIC17.09■□□□□ 0.33
DUX4Q9UBX2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 AC133552.2-202ENST00000575694 574 ntBASIC17.09■□□□□ 0.33
DUX4Q9UBX2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 AL121832.2-201ENST00000610979 668 ntBASIC17.09■□□□□ 0.33
DUX4Q9UBX2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 OR10C1-204ENST00000622521 1039 ntBASIC17.09■□□□□ 0.33
DUX4Q9UBX2 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 AC027702.1-201ENST00000563810 1770 ntBASIC17.09■□□□□ 0.33
DUX4Q9UBX2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUX4Q9UBX2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
DUX4Q9UBX2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DUX4Q9UBX2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
DUX4Q9UBX2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
DUX4Q9UBX2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.08■□□□□ 0.33
DUX4Q9UBX2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
DUX4Q9UBX2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DUX4Q9UBX2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
DUX4Q9UBX2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.08■□□□□ 0.33
DUX4Q9UBX2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
DUX4Q9UBX2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DUX4Q9UBX2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
DUX4Q9UBX2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.08■□□□□ 0.32
DUX4Q9UBX2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
DUX4Q9UBX2 CYP21A1P-202ENST00000354927 1481 ntBASIC17.08■□□□□ 0.32
DUX4Q9UBX2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DUX4Q9UBX2 AC010980.2-201ENST00000587099 1412 ntBASIC17.08■□□□□ 0.32
DUX4Q9UBX2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DUX4Q9UBX2 HLA-L-209ENST00000420110 1011 ntBASIC17.08■□□□□ 0.32
DUX4Q9UBX2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
DUX4Q9UBX2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.08■□□□□ 0.32
DUX4Q9UBX2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.08■□□□□ 0.32
DUX4Q9UBX2 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.08■□□□□ 0.32
DUX4Q9UBX2 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.08■□□□□ 0.32
DUX4Q9UBX2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
DUX4Q9UBX2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DUX4Q9UBX2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DUX4Q9UBX2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DUX4Q9UBX2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DUX4Q9UBX2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DUX4Q9UBX2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DUX4Q9UBX2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
DUX4Q9UBX2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.08■□□□□ 0.32
DUX4Q9UBX2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DUX4Q9UBX2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms