Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 AC007322.3-201ENST00000426526 701 ntBASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
COMMD3Q9UBI1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD3Q9UBI1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD3Q9UBI1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD3Q9UBI1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
COMMD3Q9UBI1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.14■□□□□ 0.33
COMMD3Q9UBI1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.14■□□□□ 0.33
COMMD3Q9UBI1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.14■□□□□ 0.33
COMMD3Q9UBI1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.14■□□□□ 0.33
COMMD3Q9UBI1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.14■□□□□ 0.33
COMMD3Q9UBI1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD3Q9UBI1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
COMMD3Q9UBI1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
COMMD3Q9UBI1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
COMMD3Q9UBI1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
COMMD3Q9UBI1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD3Q9UBI1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.14■□□□□ 0.33
COMMD3Q9UBI1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD3Q9UBI1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD3Q9UBI1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD3Q9UBI1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.13■□□□□ 0.33
COMMD3Q9UBI1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD3Q9UBI1 AC020916.1-201ENST00000587762 1774 ntBASIC17.13■□□□□ 0.33
COMMD3Q9UBI1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD3Q9UBI1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD3Q9UBI1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD3Q9UBI1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
COMMD3Q9UBI1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.13■□□□□ 0.33
COMMD3Q9UBI1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.13■□□□□ 0.33
COMMD3Q9UBI1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD3Q9UBI1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD3Q9UBI1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD3Q9UBI1 PKD1P1-201ENST00000458669 6805 ntBASIC17.13■□□□□ 0.33
COMMD3Q9UBI1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD3Q9UBI1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
COMMD3Q9UBI1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 AP001271.2-201ENST00000624018 1556 ntBASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 OR6D1P-202ENST00000641007 5290 ntBASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 AC138907.5-202ENST00000569484 235 ntBASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
COMMD3Q9UBI1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms