Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.87■□□□□ 0.61
NDE1Q9NXR1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NDE1Q9NXR1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDE1Q9NXR1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDE1Q9NXR1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDE1Q9NXR1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NDE1Q9NXR1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDE1Q9NXR1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.86■□□□□ 0.61
NDE1Q9NXR1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDE1Q9NXR1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.85■□□□□ 0.61
NDE1Q9NXR1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NDE1Q9NXR1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NDE1Q9NXR1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDE1Q9NXR1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.85■□□□□ 0.61
NDE1Q9NXR1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.85■□□□□ 0.61
NDE1Q9NXR1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.85■□□□□ 0.61
NDE1Q9NXR1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NDE1Q9NXR1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.85■□□□□ 0.61
NDE1Q9NXR1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.85■□□□□ 0.61
NDE1Q9NXR1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.85■□□□□ 0.61
NDE1Q9NXR1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
NDE1Q9NXR1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.85■□□□□ 0.61
NDE1Q9NXR1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDE1Q9NXR1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NDE1Q9NXR1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDE1Q9NXR1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.85■□□□□ 0.61
NDE1Q9NXR1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDE1Q9NXR1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.85■□□□□ 0.61
NDE1Q9NXR1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.85■□□□□ 0.61
NDE1Q9NXR1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDE1Q9NXR1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDE1Q9NXR1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 AP001160.3-201ENST00000601484 763 ntBASIC18.84■□□□□ 0.61
NDE1Q9NXR1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDE1Q9NXR1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NDE1Q9NXR1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.83■□□□□ 0.61
NDE1Q9NXR1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NDE1Q9NXR1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NDE1Q9NXR1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NDE1Q9NXR1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.83■□□□□ 0.61
NDE1Q9NXR1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NDE1Q9NXR1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NDE1Q9NXR1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
NDE1Q9NXR1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
NDE1Q9NXR1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NDE1Q9NXR1 PTBP1P-201ENST00000554374 1601 ntBASIC18.83■□□□□ 0.61
NDE1Q9NXR1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NDE1Q9NXR1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NDE1Q9NXR1 IRS3P-201ENST00000223076 1006 ntBASIC18.83■□□□□ 0.6
NDE1Q9NXR1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.83■□□□□ 0.6
NDE1Q9NXR1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms