Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 AC090340.1-201ENST00000620778 4980 ntBASIC18.11■□□□□ 0.49
POLE3Q9NRF9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 AC116562.4-201ENST00000641316 2276 ntBASIC18.1■□□□□ 0.49
POLE3Q9NRF9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLE3Q9NRF9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 AC093484.2-201ENST00000580996 2166 ntBASIC18.09■□□□□ 0.49
POLE3Q9NRF9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 YBX1P10-201ENST00000444752 975 ntBASIC18.09■□□□□ 0.49
POLE3Q9NRF9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 SOX15-203ENST00000570788 1093 ntBASIC18.09■□□□□ 0.49
POLE3Q9NRF9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 AC008687.6-201ENST00000596318 630 ntBASIC18.09■□□□□ 0.49
POLE3Q9NRF9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLE3Q9NRF9 AP006587.1-201ENST00000534129 1502 ntBASIC18.08■□□□□ 0.49
POLE3Q9NRF9 BCL2-203ENST00000589955 5011 ntBASIC18.08■□□□□ 0.49
POLE3Q9NRF9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLE3Q9NRF9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
POLE3Q9NRF9 AC005332.7-201ENST00000614046 2005 ntBASIC18.08■□□□□ 0.49
POLE3Q9NRF9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLE3Q9NRF9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLE3Q9NRF9 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
POLE3Q9NRF9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLE3Q9NRF9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
POLE3Q9NRF9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLE3Q9NRF9 AC124283.5-201ENST00000624661 1809 ntBASIC18.08■□□□□ 0.48
POLE3Q9NRF9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLE3Q9NRF9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
POLE3Q9NRF9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
POLE3Q9NRF9 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.08■□□□□ 0.48
POLE3Q9NRF9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.08■□□□□ 0.48
POLE3Q9NRF9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
POLE3Q9NRF9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
POLE3Q9NRF9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
POLE3Q9NRF9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.08■□□□□ 0.48
POLE3Q9NRF9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms