Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDLIM7Q9NR12 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDLIM7Q9NR12 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
PDLIM7Q9NR12 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.9■■□□□ 1.1
PDLIM7Q9NR12 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PDLIM7Q9NR12 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PDLIM7Q9NR12 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.89■■□□□ 1.1
PDLIM7Q9NR12 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.89■■□□□ 1.09
PDLIM7Q9NR12 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDLIM7Q9NR12 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDLIM7Q9NR12 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.89■■□□□ 1.09
PDLIM7Q9NR12 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.89■■□□□ 1.09
PDLIM7Q9NR12 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
PDLIM7Q9NR12 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.89■■□□□ 1.09
PDLIM7Q9NR12 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.89■■□□□ 1.09
PDLIM7Q9NR12 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PDLIM7Q9NR12 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.89■■□□□ 1.09
PDLIM7Q9NR12 AP000550.4-202ENST00000639755 178 ntBASIC21.89■■□□□ 1.09
PDLIM7Q9NR12 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDLIM7Q9NR12 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDLIM7Q9NR12 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PDLIM7Q9NR12 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDLIM7Q9NR12 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
PDLIM7Q9NR12 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.89■■□□□ 1.09
PDLIM7Q9NR12 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.89■■□□□ 1.09
PDLIM7Q9NR12 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDLIM7Q9NR12 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDLIM7Q9NR12 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.88■■□□□ 1.09
PDLIM7Q9NR12 LINC01521-201ENST00000504184 1943 ntBASIC21.88■■□□□ 1.09
PDLIM7Q9NR12 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDLIM7Q9NR12 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.88■■□□□ 1.09
PDLIM7Q9NR12 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDLIM7Q9NR12 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PDLIM7Q9NR12 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDLIM7Q9NR12 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDLIM7Q9NR12 RNF152P1-201ENST00000397754 604 ntBASIC21.88■■□□□ 1.09
PDLIM7Q9NR12 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.88■■□□□ 1.09
PDLIM7Q9NR12 HMGA1P5-201ENST00000412453 271 ntBASIC21.88■■□□□ 1.09
PDLIM7Q9NR12 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDLIM7Q9NR12 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PDLIM7Q9NR12 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
PDLIM7Q9NR12 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.87■■□□□ 1.09
PDLIM7Q9NR12 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDLIM7Q9NR12 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.86■■□□□ 1.09
PDLIM7Q9NR12 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.86■■□□□ 1.09
PDLIM7Q9NR12 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDLIM7Q9NR12 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDLIM7Q9NR12 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDLIM7Q9NR12 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PDLIM7Q9NR12 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PDLIM7Q9NR12 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PDLIM7Q9NR12 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PDLIM7Q9NR12 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PDLIM7Q9NR12 AC004980.1-204ENST00000429707 299 ntBASIC21.86■■□□□ 1.09
PDLIM7Q9NR12 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.86■■□□□ 1.09
PDLIM7Q9NR12 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.86■■□□□ 1.09
PDLIM7Q9NR12 AL138966.2-201ENST00000621997 464 ntBASIC21.86■■□□□ 1.09
PDLIM7Q9NR12 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDLIM7Q9NR12 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDLIM7Q9NR12 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDLIM7Q9NR12 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.86■■□□□ 1.09
PDLIM7Q9NR12 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
PDLIM7Q9NR12 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDLIM7Q9NR12 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PDLIM7Q9NR12 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms