Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 AL691432.2-201ENST00000607222 2038 ntBASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 KRT19P1-201ENST00000405746 1186 ntBASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 KRT18P14-201ENST00000534205 1250 ntBASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
C12orf4Q9NQ89 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
C12orf4Q9NQ89 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
C12orf4Q9NQ89 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
C12orf4Q9NQ89 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
C12orf4Q9NQ89 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
C12orf4Q9NQ89 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C12orf4Q9NQ89 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C12orf4Q9NQ89 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms