Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.49■□□□□ 0.55
SLC52A3Q9NQ40 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC52A3Q9NQ40 AC104417.2-201ENST00000562989 1793 ntBASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 SDHAP1-207ENST00000440850 2000 ntBASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC52A3Q9NQ40 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC52A3Q9NQ40 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC52A3Q9NQ40 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SLC52A3Q9NQ40 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC52A3Q9NQ40 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC52A3Q9NQ40 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC52A3Q9NQ40 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC52A3Q9NQ40 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC52A3Q9NQ40 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC52A3Q9NQ40 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.46■□□□□ 0.55
SLC52A3Q9NQ40 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SLC52A3Q9NQ40 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SLC52A3Q9NQ40 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SLC52A3Q9NQ40 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC52A3Q9NQ40 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.46■□□□□ 0.55
SLC52A3Q9NQ40 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC52A3Q9NQ40 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC52A3Q9NQ40 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC52A3Q9NQ40 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
SLC52A3Q9NQ40 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
SLC52A3Q9NQ40 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SLC52A3Q9NQ40 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
SLC52A3Q9NQ40 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC52A3Q9NQ40 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC52A3Q9NQ40 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SLC52A3Q9NQ40 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC52A3Q9NQ40 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC52A3Q9NQ40 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC52A3Q9NQ40 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SLC52A3Q9NQ40 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SLC52A3Q9NQ40 AC135050.7-201ENST00000624508 2218 ntBASIC18.45■□□□□ 0.54
SLC52A3Q9NQ40 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
SLC52A3Q9NQ40 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.45■□□□□ 0.54
SLC52A3Q9NQ40 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC52A3Q9NQ40 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC52A3Q9NQ40 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms