Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH9Q9HC56 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH9Q9HC56 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDH9Q9HC56 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH9Q9HC56 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDH9Q9HC56 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDH9Q9HC56 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.14■□□□□ 0.81
PCDH9Q9HC56 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDH9Q9HC56 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.14■□□□□ 0.81
PCDH9Q9HC56 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDH9Q9HC56 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH9Q9HC56 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH9Q9HC56 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PCDH9Q9HC56 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH9Q9HC56 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDH9Q9HC56 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDH9Q9HC56 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDH9Q9HC56 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDH9Q9HC56 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH9Q9HC56 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
PCDH9Q9HC56 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH9Q9HC56 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 LINC01465-201ENST00000408887 1940 ntBASIC20.13■□□□□ 0.81
PCDH9Q9HC56 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDH9Q9HC56 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 UNC93B5-201ENST00000530315 699 ntBASIC20.12■□□□□ 0.81
PCDH9Q9HC56 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH9Q9HC56 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDH9Q9HC56 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH9Q9HC56 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDH9Q9HC56 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PCDH9Q9HC56 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH9Q9HC56 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH9Q9HC56 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDH9Q9HC56 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDH9Q9HC56 SOX15-203ENST00000570788 1093 ntBASIC20.11■□□□□ 0.81
PCDH9Q9HC56 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
PCDH9Q9HC56 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDH9Q9HC56 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PCDH9Q9HC56 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH9Q9HC56 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH9Q9HC56 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDH9Q9HC56 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH9Q9HC56 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDH9Q9HC56 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH9Q9HC56 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH9Q9HC56 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH9Q9HC56 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH9Q9HC56 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH9Q9HC56 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH9Q9HC56 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH9Q9HC56 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms