Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.78■■□□□ 1.08
CBX8Q9HC52 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
CBX8Q9HC52 AC013268.1-206ENST00000638368 961 ntBASIC21.78■■□□□ 1.08
CBX8Q9HC52 AC112229.1-201ENST00000639295 961 ntBASIC21.78■■□□□ 1.08
CBX8Q9HC52 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.78■■□□□ 1.08
CBX8Q9HC52 AL031598.1-201ENST00000561511 1773 ntBASIC21.78■■□□□ 1.08
CBX8Q9HC52 WIZP1-201ENST00000531444 2299 ntBASIC21.78■■□□□ 1.08
CBX8Q9HC52 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CBX8Q9HC52 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CBX8Q9HC52 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CBX8Q9HC52 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CBX8Q9HC52 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.78■■□□□ 1.08
CBX8Q9HC52 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CBX8Q9HC52 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.78■■□□□ 1.08
CBX8Q9HC52 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.78■■□□□ 1.08
CBX8Q9HC52 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.77■■□□□ 1.08
CBX8Q9HC52 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CBX8Q9HC52 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CBX8Q9HC52 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CBX8Q9HC52 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CBX8Q9HC52 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CBX8Q9HC52 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
CBX8Q9HC52 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
CBX8Q9HC52 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CBX8Q9HC52 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.77■■□□□ 1.08
CBX8Q9HC52 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.77■■□□□ 1.08
CBX8Q9HC52 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CBX8Q9HC52 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CBX8Q9HC52 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.77■■□□□ 1.08
CBX8Q9HC52 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CBX8Q9HC52 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.77■■□□□ 1.08
CBX8Q9HC52 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CBX8Q9HC52 AC018470.1-201ENST00000624790 3129 ntBASIC21.77■■□□□ 1.08
CBX8Q9HC52 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
CBX8Q9HC52 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CBX8Q9HC52 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CBX8Q9HC52 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.76■■□□□ 1.07
CBX8Q9HC52 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CBX8Q9HC52 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CBX8Q9HC52 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CBX8Q9HC52 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CBX8Q9HC52 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CBX8Q9HC52 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.76■■□□□ 1.07
CBX8Q9HC52 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CBX8Q9HC52 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CBX8Q9HC52 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.76■■□□□ 1.07
CBX8Q9HC52 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.76■■□□□ 1.07
CBX8Q9HC52 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CBX8Q9HC52 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CBX8Q9HC52 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CBX8Q9HC52 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.76■■□□□ 1.07
CBX8Q9HC52 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CBX8Q9HC52 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CBX8Q9HC52 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CBX8Q9HC52 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CBX8Q9HC52 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CBX8Q9HC52 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CBX8Q9HC52 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CBX8Q9HC52 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.75■■□□□ 1.07
CBX8Q9HC52 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.75■■□□□ 1.07
CBX8Q9HC52 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CBX8Q9HC52 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.75■■□□□ 1.07
CBX8Q9HC52 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.75■■□□□ 1.07
CBX8Q9HC52 AC023632.3-201ENST00000521633 145 ntBASIC21.75■■□□□ 1.07
CBX8Q9HC52 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.75■■□□□ 1.07
CBX8Q9HC52 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CBX8Q9HC52 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.75■■□□□ 1.07
CBX8Q9HC52 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.75■■□□□ 1.07
CBX8Q9HC52 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.75■■□□□ 1.07
CBX8Q9HC52 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CBX8Q9HC52 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CBX8Q9HC52 FP475955.4-201ENST00000623131 1990 ntBASIC21.75■■□□□ 1.07
CBX8Q9HC52 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CBX8Q9HC52 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CBX8Q9HC52 AC018553.1-201ENST00000616682 1458 ntBASIC21.75■■□□□ 1.07
CBX8Q9HC52 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CBX8Q9HC52 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.75■■□□□ 1.07
CBX8Q9HC52 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CBX8Q9HC52 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.75■■□□□ 1.07
CBX8Q9HC52 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CBX8Q9HC52 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CBX8Q9HC52 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CBX8Q9HC52 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CBX8Q9HC52 AC090164.3-201ENST00000610780 2143 ntBASIC21.74■■□□□ 1.07
CBX8Q9HC52 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CBX8Q9HC52 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.74■■□□□ 1.07
CBX8Q9HC52 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CBX8Q9HC52 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.74■■□□□ 1.07
CBX8Q9HC52 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CBX8Q9HC52 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.74■■□□□ 1.07
CBX8Q9HC52 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CBX8Q9HC52 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
CBX8Q9HC52 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CBX8Q9HC52 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CBX8Q9HC52 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CBX8Q9HC52 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.74■■□□□ 1.07
CBX8Q9HC52 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CBX8Q9HC52 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.74■■□□□ 1.07
CBX8Q9HC52 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CBX8Q9HC52 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms