Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 CCDC92B-201ENST00000575506 885 ntBASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 AC104187.1-201ENST00000607510 612 ntBASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 AC243732.1-201ENST00000612648 864 ntBASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 AC005332.8-201ENST00000622750 2735 ntBASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC13.05□□□□□ -0.32
SND1-IT1Q9HBX3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SND1-IT1Q9HBX3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms