Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 HTR7P1-201ENST00000538670 1336 ntBASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 AC018445.3-201ENST00000624177 1945 ntBASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 AC138932.1-201ENST00000534164 6830 ntBASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR1BQ9H9Y6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
POLR1BQ9H9Y6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
POLR1BQ9H9Y6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
POLR1BQ9H9Y6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
POLR1BQ9H9Y6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
POLR1BQ9H9Y6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.27■□□□□ 0.67
POLR1BQ9H9Y6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.26■□□□□ 0.67
POLR1BQ9H9Y6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
POLR1BQ9H9Y6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLR1BQ9H9Y6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLR1BQ9H9Y6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLR1BQ9H9Y6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLR1BQ9H9Y6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.26■□□□□ 0.67
POLR1BQ9H9Y6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLR1BQ9H9Y6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.26■□□□□ 0.67
POLR1BQ9H9Y6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR1BQ9H9Y6 AC006128.1-201ENST00000624704 1661 ntBASIC19.26■□□□□ 0.67
POLR1BQ9H9Y6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLR1BQ9H9Y6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR1BQ9H9Y6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR1BQ9H9Y6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
POLR1BQ9H9Y6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.26■□□□□ 0.67
POLR1BQ9H9Y6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR1BQ9H9Y6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.26■□□□□ 0.67
POLR1BQ9H9Y6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLR1BQ9H9Y6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 KRT18P35-201ENST00000510488 1269 ntBASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.25■□□□□ 0.67
POLR1BQ9H9Y6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 ARMC10P1-201ENST00000313754 855 ntBASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 AL590326.2-201ENST00000625139 305 ntBASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms