Protein–RNA interactions for Protein: Q9H4I3

TRABD, TraB domain-containing protein, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABDQ9H4I3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRABDQ9H4I3 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.05■□□□□ 0.8
TRABDQ9H4I3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.05■□□□□ 0.8
TRABDQ9H4I3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.05■□□□□ 0.8
TRABDQ9H4I3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRABDQ9H4I3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRABDQ9H4I3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRABDQ9H4I3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRABDQ9H4I3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TRABDQ9H4I3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.05■□□□□ 0.8
TRABDQ9H4I3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRABDQ9H4I3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRABDQ9H4I3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRABDQ9H4I3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.05■□□□□ 0.8
TRABDQ9H4I3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.05■□□□□ 0.8
TRABDQ9H4I3 AC092368.3-202ENST00000574180 1591 ntBASIC20.04■□□□□ 0.8
TRABDQ9H4I3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.04■□□□□ 0.8
TRABDQ9H4I3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRABDQ9H4I3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
TRABDQ9H4I3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
TRABDQ9H4I3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRABDQ9H4I3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRABDQ9H4I3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRABDQ9H4I3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRABDQ9H4I3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRABDQ9H4I3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.04■□□□□ 0.8
TRABDQ9H4I3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.04■□□□□ 0.8
TRABDQ9H4I3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TRABDQ9H4I3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.04■□□□□ 0.8
TRABDQ9H4I3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRABDQ9H4I3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.04■□□□□ 0.8
TRABDQ9H4I3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRABDQ9H4I3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRABDQ9H4I3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRABDQ9H4I3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.03■□□□□ 0.8
TRABDQ9H4I3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TRABDQ9H4I3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRABDQ9H4I3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRABDQ9H4I3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRABDQ9H4I3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRABDQ9H4I3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRABDQ9H4I3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRABDQ9H4I3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRABDQ9H4I3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TRABDQ9H4I3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TRABDQ9H4I3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.03■□□□□ 0.8
TRABDQ9H4I3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.03■□□□□ 0.8
TRABDQ9H4I3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.03■□□□□ 0.8
TRABDQ9H4I3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRABDQ9H4I3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRABDQ9H4I3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TRABDQ9H4I3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRABDQ9H4I3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRABDQ9H4I3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.02■□□□□ 0.8
TRABDQ9H4I3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.02■□□□□ 0.8
TRABDQ9H4I3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRABDQ9H4I3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TRABDQ9H4I3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRABDQ9H4I3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRABDQ9H4I3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRABDQ9H4I3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRABDQ9H4I3 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.02■□□□□ 0.8
TRABDQ9H4I3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.02■□□□□ 0.8
TRABDQ9H4I3 PNMA6B-201ENST00000538162 1200 ntBASIC20.02■□□□□ 0.8
TRABDQ9H4I3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.02■□□□□ 0.8
TRABDQ9H4I3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRABDQ9H4I3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.02■□□□□ 0.8
TRABDQ9H4I3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.02■□□□□ 0.8
TRABDQ9H4I3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.02■□□□□ 0.8
TRABDQ9H4I3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRABDQ9H4I3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRABDQ9H4I3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TRABDQ9H4I3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
TRABDQ9H4I3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.02■□□□□ 0.8
TRABDQ9H4I3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRABDQ9H4I3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.02■□□□□ 0.79
TRABDQ9H4I3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.02■□□□□ 0.79
TRABDQ9H4I3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
TRABDQ9H4I3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRABDQ9H4I3 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.02■□□□□ 0.79
TRABDQ9H4I3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRABDQ9H4I3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRABDQ9H4I3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRABDQ9H4I3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRABDQ9H4I3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRABDQ9H4I3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.01■□□□□ 0.79
TRABDQ9H4I3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRABDQ9H4I3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TRABDQ9H4I3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRABDQ9H4I3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRABDQ9H4I3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRABDQ9H4I3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRABDQ9H4I3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.01■□□□□ 0.79
TRABDQ9H4I3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TRABDQ9H4I3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.01■□□□□ 0.79
TRABDQ9H4I3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRABDQ9H4I3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.01■□□□□ 0.79
TRABDQ9H4I3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.01■□□□□ 0.79
TRABDQ9H4I3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.01■□□□□ 0.79
TRABDQ9H4I3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms