Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 ITM2C-210ENST00000620962 501 ntBASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 AC008694.1-202ENST00000636953 945 ntBASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM55Q9BYV6 AL138781.2-201ENST00000617896 1843 ntBASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 KRT18P29-201ENST00000397031 1267 ntBASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 AC069236.1-201ENST00000604339 616 ntBASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM55Q9BYV6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 AC009237.14-201ENST00000609975 1594 ntBASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 BX276092.2-201ENST00000417668 665 ntBASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 AC092118.2-201ENST00000613495 667 ntBASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 LETM1P2-201ENST00000597330 2178 ntBASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM55Q9BYV6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM55Q9BYV6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM55Q9BYV6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRIM55Q9BYV6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM55Q9BYV6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM55Q9BYV6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM55Q9BYV6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM55Q9BYV6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM55Q9BYV6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM55Q9BYV6 PRORSD1P-201ENST00000295112 541 ntBASIC19.6■□□□□ 0.73
TRIM55Q9BYV6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRIM55Q9BYV6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM55Q9BYV6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM55Q9BYV6 AL512625.2-201ENST00000417533 625 ntBASIC19.6■□□□□ 0.73
TRIM55Q9BYV6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM55Q9BYV6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM55Q9BYV6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.6■□□□□ 0.73
TRIM55Q9BYV6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM55Q9BYV6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TRIM55Q9BYV6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM55Q9BYV6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM55Q9BYV6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms