Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VRK1Q99986 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.17■□□□□ 0.34
VRK1Q99986 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
VRK1Q99986 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VRK1Q99986 AP000974.1-201ENST00000623909 2387 ntBASIC17.17■□□□□ 0.34
VRK1Q99986 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VRK1Q99986 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VRK1Q99986 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
VRK1Q99986 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.17■□□□□ 0.34
VRK1Q99986 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.17■□□□□ 0.34
VRK1Q99986 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.17■□□□□ 0.34
VRK1Q99986 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.17■□□□□ 0.34
VRK1Q99986 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
VRK1Q99986 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VRK1Q99986 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VRK1Q99986 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VRK1Q99986 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.17■□□□□ 0.34
VRK1Q99986 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.17■□□□□ 0.34
VRK1Q99986 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.17■□□□□ 0.34
VRK1Q99986 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.17■□□□□ 0.34
VRK1Q99986 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.17■□□□□ 0.34
VRK1Q99986 KRT8P36-201ENST00000489121 1440 ntBASIC17.17■□□□□ 0.34
VRK1Q99986 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.17■□□□□ 0.34
VRK1Q99986 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.17■□□□□ 0.34
VRK1Q99986 AC120498.8-201ENST00000614275 531 ntBASIC17.17■□□□□ 0.34
VRK1Q99986 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VRK1Q99986 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.17■□□□□ 0.34
VRK1Q99986 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VRK1Q99986 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.17■□□□□ 0.34
VRK1Q99986 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.17■□□□□ 0.34
VRK1Q99986 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VRK1Q99986 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
VRK1Q99986 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.17■□□□□ 0.34
VRK1Q99986 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VRK1Q99986 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VRK1Q99986 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
VRK1Q99986 TNXA-203ENST00000507684 2038 ntBASIC17.16■□□□□ 0.34
VRK1Q99986 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.16■□□□□ 0.34
VRK1Q99986 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.16■□□□□ 0.34
VRK1Q99986 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VRK1Q99986 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VRK1Q99986 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VRK1Q99986 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VRK1Q99986 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VRK1Q99986 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VRK1Q99986 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VRK1Q99986 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VRK1Q99986 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
VRK1Q99986 AC004408.2-201ENST00000623613 2777 ntBASIC17.16■□□□□ 0.34
VRK1Q99986 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VRK1Q99986 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VRK1Q99986 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.16■□□□□ 0.34
VRK1Q99986 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.16■□□□□ 0.34
VRK1Q99986 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.16■□□□□ 0.34
VRK1Q99986 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.16■□□□□ 0.34
VRK1Q99986 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.16■□□□□ 0.34
VRK1Q99986 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
VRK1Q99986 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VRK1Q99986 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VRK1Q99986 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.16■□□□□ 0.34
VRK1Q99986 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
VRK1Q99986 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VRK1Q99986 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VRK1Q99986 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.16■□□□□ 0.34
VRK1Q99986 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VRK1Q99986 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VRK1Q99986 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.16■□□□□ 0.34
VRK1Q99986 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.16■□□□□ 0.34
VRK1Q99986 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
VRK1Q99986 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VRK1Q99986 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
VRK1Q99986 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.15■□□□□ 0.34
VRK1Q99986 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
VRK1Q99986 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.15■□□□□ 0.34
VRK1Q99986 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
VRK1Q99986 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
VRK1Q99986 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.15■□□□□ 0.34
VRK1Q99986 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
VRK1Q99986 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.15■□□□□ 0.34
VRK1Q99986 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
VRK1Q99986 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK1Q99986 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms