Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 AC019069.1-201ENST00000610008 1333 ntBASIC16.78■□□□□ 0.28
CMTM3Q96MX0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CMTM3Q96MX0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CMTM3Q96MX0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.77■□□□□ 0.28
CMTM3Q96MX0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CMTM3Q96MX0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CMTM3Q96MX0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CMTM3Q96MX0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CMTM3Q96MX0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.77■□□□□ 0.28
CMTM3Q96MX0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.77■□□□□ 0.28
CMTM3Q96MX0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
CMTM3Q96MX0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CMTM3Q96MX0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CMTM3Q96MX0 AC091305.1-201ENST00000479476 895 ntBASIC16.77■□□□□ 0.28
CMTM3Q96MX0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.77■□□□□ 0.28
CMTM3Q96MX0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.77■□□□□ 0.28
CMTM3Q96MX0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.77■□□□□ 0.28
CMTM3Q96MX0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CMTM3Q96MX0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CMTM3Q96MX0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CMTM3Q96MX0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CMTM3Q96MX0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CMTM3Q96MX0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CMTM3Q96MX0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.77■□□□□ 0.27
CMTM3Q96MX0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CMTM3Q96MX0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CMTM3Q96MX0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.77■□□□□ 0.27
CMTM3Q96MX0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 AP000997.3-201ENST00000623333 2250 ntBASIC16.76■□□□□ 0.27
CMTM3Q96MX0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 AL512353.2-201ENST00000448759 1962 ntBASIC16.76■□□□□ 0.27
CMTM3Q96MX0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
CMTM3Q96MX0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.75■□□□□ 0.27
CMTM3Q96MX0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CMTM3Q96MX0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CMTM3Q96MX0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CMTM3Q96MX0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.75■□□□□ 0.27
CMTM3Q96MX0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CMTM3Q96MX0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
CMTM3Q96MX0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CMTM3Q96MX0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CMTM3Q96MX0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CMTM3Q96MX0 MIR939-201ENST00000401314 82 ntBASIC16.75■□□□□ 0.27
CMTM3Q96MX0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CMTM3Q96MX0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CMTM3Q96MX0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CMTM3Q96MX0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CMTM3Q96MX0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.75■□□□□ 0.27
CMTM3Q96MX0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CMTM3Q96MX0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CMTM3Q96MX0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CMTM3Q96MX0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CMTM3Q96MX0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.75■□□□□ 0.27
CMTM3Q96MX0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms