Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SPG11Q96JI7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.57■□□□□ 0.24
SPG11Q96JI7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SPG11Q96JI7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
SPG11Q96JI7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPG11Q96JI7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.56■□□□□ 0.24
SPG11Q96JI7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.56■□□□□ 0.24
SPG11Q96JI7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPG11Q96JI7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPG11Q96JI7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPG11Q96JI7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.56■□□□□ 0.24
SPG11Q96JI7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPG11Q96JI7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.56■□□□□ 0.24
SPG11Q96JI7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.56■□□□□ 0.24
SPG11Q96JI7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.56■□□□□ 0.24
SPG11Q96JI7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.56■□□□□ 0.24
SPG11Q96JI7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.56■□□□□ 0.24
SPG11Q96JI7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.56■□□□□ 0.24
SPG11Q96JI7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.56■□□□□ 0.24
SPG11Q96JI7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SPG11Q96JI7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SPG11Q96JI7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPG11Q96JI7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPG11Q96JI7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPG11Q96JI7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SPG11Q96JI7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
SPG11Q96JI7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPG11Q96JI7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPG11Q96JI7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.56■□□□□ 0.24
SPG11Q96JI7 CA15P1-201ENST00000481698 905 ntBASIC16.56■□□□□ 0.24
SPG11Q96JI7 UNC93B7-201ENST00000509439 705 ntBASIC16.56■□□□□ 0.24
SPG11Q96JI7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.56■□□□□ 0.24
SPG11Q96JI7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
SPG11Q96JI7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.56■□□□□ 0.24
SPG11Q96JI7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.56■□□□□ 0.24
SPG11Q96JI7 AC012313.10-201ENST00000623509 926 ntBASIC16.56■□□□□ 0.24
SPG11Q96JI7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPG11Q96JI7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.55■□□□□ 0.24
SPG11Q96JI7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.55■□□□□ 0.24
SPG11Q96JI7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.55■□□□□ 0.24
SPG11Q96JI7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SPG11Q96JI7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SPG11Q96JI7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SPG11Q96JI7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SPG11Q96JI7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SPG11Q96JI7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SPG11Q96JI7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
SPG11Q96JI7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SPG11Q96JI7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SPG11Q96JI7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SPG11Q96JI7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.55■□□□□ 0.24
SPG11Q96JI7 AC009078.2-202ENST00000463353 338 ntBASIC16.55■□□□□ 0.24
SPG11Q96JI7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
SPG11Q96JI7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.55■□□□□ 0.24
SPG11Q96JI7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SPG11Q96JI7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
SPG11Q96JI7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPG11Q96JI7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPG11Q96JI7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPG11Q96JI7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SPG11Q96JI7 TUBB8P6-201ENST00000436895 1288 ntBASIC16.54■□□□□ 0.24
SPG11Q96JI7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SPG11Q96JI7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.54■□□□□ 0.24
SPG11Q96JI7 AL353719.1-201ENST00000566847 864 ntBASIC16.54■□□□□ 0.24
SPG11Q96JI7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
SPG11Q96JI7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SPG11Q96JI7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.54■□□□□ 0.24
SPG11Q96JI7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SPG11Q96JI7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPG11Q96JI7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPG11Q96JI7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPG11Q96JI7 FP700111.2-201ENST00000619190 1892 ntBASIC16.54■□□□□ 0.24
SPG11Q96JI7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPG11Q96JI7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPG11Q96JI7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPG11Q96JI7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.54■□□□□ 0.24
SPG11Q96JI7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPG11Q96JI7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPG11Q96JI7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.54■□□□□ 0.24
SPG11Q96JI7 KRT17P6-201ENST00000453795 1220 ntBASIC16.54■□□□□ 0.24
SPG11Q96JI7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPG11Q96JI7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.54■□□□□ 0.24
SPG11Q96JI7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.54■□□□□ 0.24
SPG11Q96JI7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SPG11Q96JI7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SPG11Q96JI7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPG11Q96JI7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.53■□□□□ 0.24
SPG11Q96JI7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.53■□□□□ 0.24
SPG11Q96JI7 NPAP1P7-201ENST00000613027 823 ntBASIC16.53■□□□□ 0.24
SPG11Q96JI7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
SPG11Q96JI7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPG11Q96JI7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.53■□□□□ 0.24
SPG11Q96JI7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPG11Q96JI7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPG11Q96JI7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPG11Q96JI7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPG11Q96JI7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.53■□□□□ 0.24
SPG11Q96JI7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.53■□□□□ 0.24
SPG11Q96JI7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SPG11Q96JI7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms