Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ITCHQ96J02 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ITCHQ96J02 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.57■□□□□ 0.56
ITCHQ96J02 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ITCHQ96J02 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ITCHQ96J02 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ITCHQ96J02 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ITCHQ96J02 AC093503.3-201ENST00000624917 2352 ntBASIC18.56■□□□□ 0.56
ITCHQ96J02 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ITCHQ96J02 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
ITCHQ96J02 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ITCHQ96J02 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ITCHQ96J02 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.56■□□□□ 0.56
ITCHQ96J02 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.56■□□□□ 0.56
ITCHQ96J02 LSM12P1-201ENST00000411836 588 ntBASIC18.56■□□□□ 0.56
ITCHQ96J02 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ITCHQ96J02 AC093787.1-201ENST00000450396 207 ntBASIC18.56■□□□□ 0.56
ITCHQ96J02 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ITCHQ96J02 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.56■□□□□ 0.56
ITCHQ96J02 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.56■□□□□ 0.56
ITCHQ96J02 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.56■□□□□ 0.56
ITCHQ96J02 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.56■□□□□ 0.56
ITCHQ96J02 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.56■□□□□ 0.56
ITCHQ96J02 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.56■□□□□ 0.56
ITCHQ96J02 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.56■□□□□ 0.56
ITCHQ96J02 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ITCHQ96J02 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ITCHQ96J02 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.56■□□□□ 0.56
ITCHQ96J02 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ITCHQ96J02 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ITCHQ96J02 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.56■□□□□ 0.56
ITCHQ96J02 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ITCHQ96J02 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.55■□□□□ 0.56
ITCHQ96J02 AC116351.2-201ENST00000606540 1585 ntBASIC18.55■□□□□ 0.56
ITCHQ96J02 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ITCHQ96J02 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
ITCHQ96J02 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ITCHQ96J02 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ITCHQ96J02 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ITCHQ96J02 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ITCHQ96J02 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ITCHQ96J02 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ITCHQ96J02 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.55■□□□□ 0.56
ITCHQ96J02 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.55■□□□□ 0.56
ITCHQ96J02 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ITCHQ96J02 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ITCHQ96J02 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ITCHQ96J02 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.55■□□□□ 0.56
ITCHQ96J02 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ITCHQ96J02 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.55■□□□□ 0.56
ITCHQ96J02 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.55■□□□□ 0.56
ITCHQ96J02 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.55■□□□□ 0.56
ITCHQ96J02 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.55■□□□□ 0.56
ITCHQ96J02 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
ITCHQ96J02 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.54■□□□□ 0.56
ITCHQ96J02 NEFHP1-201ENST00000412845 2629 ntBASIC18.54■□□□□ 0.56
ITCHQ96J02 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ITCHQ96J02 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.54■□□□□ 0.56
ITCHQ96J02 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.54■□□□□ 0.56
ITCHQ96J02 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ITCHQ96J02 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ITCHQ96J02 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
ITCHQ96J02 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ITCHQ96J02 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ITCHQ96J02 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.54■□□□□ 0.56
ITCHQ96J02 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
ITCHQ96J02 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
ITCHQ96J02 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.54■□□□□ 0.56
ITCHQ96J02 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.54■□□□□ 0.56
ITCHQ96J02 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
ITCHQ96J02 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ITCHQ96J02 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ITCHQ96J02 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ITCHQ96J02 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ITCHQ96J02 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
ITCHQ96J02 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ITCHQ96J02 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ITCHQ96J02 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ITCHQ96J02 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ITCHQ96J02 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ITCHQ96J02 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ITCHQ96J02 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ITCHQ96J02 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.53■□□□□ 0.56
ITCHQ96J02 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ITCHQ96J02 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ITCHQ96J02 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.53■□□□□ 0.56
ITCHQ96J02 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ITCHQ96J02 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ITCHQ96J02 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ITCHQ96J02 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.53■□□□□ 0.56
ITCHQ96J02 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.53■□□□□ 0.56
ITCHQ96J02 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
ITCHQ96J02 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.53■□□□□ 0.56
ITCHQ96J02 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.53■□□□□ 0.56
ITCHQ96J02 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ITCHQ96J02 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ITCHQ96J02 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ITCHQ96J02 AC005181.1-201ENST00000604782 1256 ntBASIC18.53■□□□□ 0.56
ITCHQ96J02 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.53■□□□□ 0.56
ITCHQ96J02 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms