Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.62■□□□□ 0.73
CHMP6Q96FZ7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CHMP6Q96FZ7 AC068880.1-201ENST00000507289 2297 ntBASIC19.62■□□□□ 0.73
CHMP6Q96FZ7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.62■□□□□ 0.73
CHMP6Q96FZ7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 AC079140.4-201ENST00000507448 529 ntBASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CHMP6Q96FZ7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 FAM21FP-204ENST00000608637 956 ntBASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP6Q96FZ7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP6Q96FZ7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP6Q96FZ7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP6Q96FZ7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP6Q96FZ7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP6Q96FZ7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP6Q96FZ7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP6Q96FZ7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP6Q96FZ7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP6Q96FZ7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.59■□□□□ 0.73
CHMP6Q96FZ7 TPRG1LP1-201ENST00000598702 760 ntBASIC19.59■□□□□ 0.73
CHMP6Q96FZ7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP6Q96FZ7 AL031598.1-201ENST00000561511 1773 ntBASIC19.59■□□□□ 0.73
CHMP6Q96FZ7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP6Q96FZ7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP6Q96FZ7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
CHMP6Q96FZ7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP6Q96FZ7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP6Q96FZ7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP6Q96FZ7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP6Q96FZ7 AP001271.2-201ENST00000624018 1556 ntBASIC19.58■□□□□ 0.73
CHMP6Q96FZ7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP6Q96FZ7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP6Q96FZ7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP6Q96FZ7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP6Q96FZ7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP6Q96FZ7 AC120498.10-201ENST00000621827 505 ntBASIC19.58■□□□□ 0.72
CHMP6Q96FZ7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP6Q96FZ7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CHMP6Q96FZ7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.58■□□□□ 0.72
CHMP6Q96FZ7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP6Q96FZ7 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms