Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LRRC39Q96DD0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
LRRC39Q96DD0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.68■□□□□ 0.74
LRRC39Q96DD0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.68■□□□□ 0.74
LRRC39Q96DD0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC39Q96DD0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC39Q96DD0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC39Q96DD0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
LRRC39Q96DD0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.68■□□□□ 0.74
LRRC39Q96DD0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC39Q96DD0 AL138781.2-201ENST00000617896 1843 ntBASIC19.68■□□□□ 0.74
LRRC39Q96DD0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC39Q96DD0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LRRC39Q96DD0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.68■□□□□ 0.74
LRRC39Q96DD0 AC026185.1-201ENST00000445748 174 ntBASIC19.68■□□□□ 0.74
LRRC39Q96DD0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.68■□□□□ 0.74
LRRC39Q96DD0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.68■□□□□ 0.74
LRRC39Q96DD0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC39Q96DD0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC39Q96DD0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC39Q96DD0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
LRRC39Q96DD0 AL161938.1-201ENST00000569833 2180 ntBASIC19.68■□□□□ 0.74
LRRC39Q96DD0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC39Q96DD0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC39Q96DD0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC39Q96DD0 TEX21P-204ENST00000641479 1693 ntBASIC19.68■□□□□ 0.74
LRRC39Q96DD0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC39Q96DD0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LRRC39Q96DD0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC39Q96DD0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LRRC39Q96DD0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
LRRC39Q96DD0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC39Q96DD0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC39Q96DD0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC39Q96DD0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.66■□□□□ 0.74
LRRC39Q96DD0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.66■□□□□ 0.74
LRRC39Q96DD0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.66■□□□□ 0.74
LRRC39Q96DD0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC39Q96DD0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC39Q96DD0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.66■□□□□ 0.74
LRRC39Q96DD0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LRRC39Q96DD0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.66■□□□□ 0.74
LRRC39Q96DD0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.66■□□□□ 0.74
LRRC39Q96DD0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LRRC39Q96DD0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
LRRC39Q96DD0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC39Q96DD0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC39Q96DD0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LRRC39Q96DD0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LRRC39Q96DD0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC39Q96DD0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms