Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC58Q96CX6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRC58Q96CX6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRC58Q96CX6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC58Q96CX6 AC026471.1-201ENST00000564629 3026 ntBASIC18.54■□□□□ 0.56
LRRC58Q96CX6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC58Q96CX6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC58Q96CX6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRC58Q96CX6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC58Q96CX6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.54■□□□□ 0.56
LRRC58Q96CX6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.54■□□□□ 0.56
LRRC58Q96CX6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC58Q96CX6 AC068338.2-201ENST00000563278 1430 ntBASIC18.54■□□□□ 0.56
LRRC58Q96CX6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRC58Q96CX6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRC58Q96CX6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC58Q96CX6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LRRC58Q96CX6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC58Q96CX6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRC58Q96CX6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.54■□□□□ 0.56
LRRC58Q96CX6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC58Q96CX6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 KRT18P11-201ENST00000435214 1283 ntBASIC18.53■□□□□ 0.56
LRRC58Q96CX6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 NTF6G-201ENST00000591094 616 ntBASIC18.53■□□□□ 0.56
LRRC58Q96CX6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 AC009113.1-201ENST00000570267 2443 ntBASIC18.53■□□□□ 0.56
LRRC58Q96CX6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC58Q96CX6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC58Q96CX6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC58Q96CX6 AC018553.1-201ENST00000616682 1458 ntBASIC18.52■□□□□ 0.56
LRRC58Q96CX6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC58Q96CX6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC58Q96CX6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LRRC58Q96CX6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC58Q96CX6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC58Q96CX6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC58Q96CX6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC58Q96CX6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.52■□□□□ 0.56
LRRC58Q96CX6 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.52■□□□□ 0.56
LRRC58Q96CX6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.52■□□□□ 0.56
LRRC58Q96CX6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC58Q96CX6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC58Q96CX6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC58Q96CX6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC58Q96CX6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
LRRC58Q96CX6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC58Q96CX6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC58Q96CX6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.52■□□□□ 0.55
LRRC58Q96CX6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC58Q96CX6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.52■□□□□ 0.55
LRRC58Q96CX6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC58Q96CX6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC58Q96CX6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC58Q96CX6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.52■□□□□ 0.55
LRRC58Q96CX6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
LRRC58Q96CX6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.52■□□□□ 0.55
LRRC58Q96CX6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
LRRC58Q96CX6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC58Q96CX6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC58Q96CX6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC58Q96CX6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC58Q96CX6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
LRRC58Q96CX6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
LRRC58Q96CX6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC58Q96CX6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.51■□□□□ 0.55
LRRC58Q96CX6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRC58Q96CX6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC58Q96CX6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC58Q96CX6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRC58Q96CX6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC58Q96CX6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LRRC58Q96CX6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.51■□□□□ 0.55
LRRC58Q96CX6 AC026271.2-201ENST00000428091 497 ntBASIC18.51■□□□□ 0.55
LRRC58Q96CX6 C2orf69P4-201ENST00000565394 541 ntBASIC18.51■□□□□ 0.55
LRRC58Q96CX6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC58Q96CX6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.51■□□□□ 0.55
LRRC58Q96CX6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms