Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APH1AQ96BI3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
APH1AQ96BI3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APH1AQ96BI3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APH1AQ96BI3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
APH1AQ96BI3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
APH1AQ96BI3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
APH1AQ96BI3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.3■□□□□ 0.36
APH1AQ96BI3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APH1AQ96BI3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APH1AQ96BI3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.29■□□□□ 0.36
APH1AQ96BI3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
APH1AQ96BI3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APH1AQ96BI3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
APH1AQ96BI3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
APH1AQ96BI3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APH1AQ96BI3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
APH1AQ96BI3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APH1AQ96BI3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
APH1AQ96BI3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APH1AQ96BI3 RPS2P55-201ENST00000397318 883 ntBASIC17.29■□□□□ 0.36
APH1AQ96BI3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APH1AQ96BI3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APH1AQ96BI3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
APH1AQ96BI3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APH1AQ96BI3 AC107956.1-201ENST00000494359 873 ntBASIC17.29■□□□□ 0.36
APH1AQ96BI3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.29■□□□□ 0.36
APH1AQ96BI3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.29■□□□□ 0.36
APH1AQ96BI3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APH1AQ96BI3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.29■□□□□ 0.36
APH1AQ96BI3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.29■□□□□ 0.36
APH1AQ96BI3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
APH1AQ96BI3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.29■□□□□ 0.36
APH1AQ96BI3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.29■□□□□ 0.36
APH1AQ96BI3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
APH1AQ96BI3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APH1AQ96BI3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
APH1AQ96BI3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.29■□□□□ 0.36
APH1AQ96BI3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.29■□□□□ 0.36
APH1AQ96BI3 KRT8P8-201ENST00000434750 1448 ntBASIC17.29■□□□□ 0.36
APH1AQ96BI3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APH1AQ96BI3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
APH1AQ96BI3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APH1AQ96BI3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
APH1AQ96BI3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
APH1AQ96BI3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
APH1AQ96BI3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
APH1AQ96BI3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
APH1AQ96BI3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APH1AQ96BI3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
APH1AQ96BI3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
APH1AQ96BI3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.28■□□□□ 0.36
APH1AQ96BI3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.28■□□□□ 0.36
APH1AQ96BI3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.28■□□□□ 0.36
APH1AQ96BI3 AF186192.3-201ENST00000583427 947 ntBASIC17.28■□□□□ 0.36
APH1AQ96BI3 AC233702.5-201ENST00000584107 538 ntBASIC17.28■□□□□ 0.36
APH1AQ96BI3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.28■□□□□ 0.36
APH1AQ96BI3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
APH1AQ96BI3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
APH1AQ96BI3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
APH1AQ96BI3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.28■□□□□ 0.36
APH1AQ96BI3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APH1AQ96BI3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APH1AQ96BI3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.28■□□□□ 0.36
APH1AQ96BI3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APH1AQ96BI3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APH1AQ96BI3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
APH1AQ96BI3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
APH1AQ96BI3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
APH1AQ96BI3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
APH1AQ96BI3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
APH1AQ96BI3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
APH1AQ96BI3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
APH1AQ96BI3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
APH1AQ96BI3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
APH1AQ96BI3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.27■□□□□ 0.36
APH1AQ96BI3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
APH1AQ96BI3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
APH1AQ96BI3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.27■□□□□ 0.36
APH1AQ96BI3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
APH1AQ96BI3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
APH1AQ96BI3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.27■□□□□ 0.36
APH1AQ96BI3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.27■□□□□ 0.36
APH1AQ96BI3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
APH1AQ96BI3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
APH1AQ96BI3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.27■□□□□ 0.36
APH1AQ96BI3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.27■□□□□ 0.36
APH1AQ96BI3 Z99916.2-201ENST00000604037 246 ntBASIC17.27■□□□□ 0.36
APH1AQ96BI3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
APH1AQ96BI3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.27■□□□□ 0.36
APH1AQ96BI3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.27■□□□□ 0.36
APH1AQ96BI3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
APH1AQ96BI3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
APH1AQ96BI3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
APH1AQ96BI3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
APH1AQ96BI3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.27■□□□□ 0.35
APH1AQ96BI3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
APH1AQ96BI3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
APH1AQ96BI3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
APH1AQ96BI3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms