Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
VPS33AQ96AX1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS33AQ96AX1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS33AQ96AX1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS33AQ96AX1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS33AQ96AX1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.72■□□□□ 0.59
VPS33AQ96AX1 CYP2T1P-201ENST00000432607 1285 ntBASIC18.72■□□□□ 0.59
VPS33AQ96AX1 KRT18P5-201ENST00000436075 1291 ntBASIC18.72■□□□□ 0.59
VPS33AQ96AX1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.72■□□□□ 0.59
VPS33AQ96AX1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.72■□□□□ 0.59
VPS33AQ96AX1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS33AQ96AX1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
VPS33AQ96AX1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.72■□□□□ 0.59
VPS33AQ96AX1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.72■□□□□ 0.59
VPS33AQ96AX1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
VPS33AQ96AX1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.72■□□□□ 0.59
VPS33AQ96AX1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS33AQ96AX1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VPS33AQ96AX1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VPS33AQ96AX1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS33AQ96AX1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.72■□□□□ 0.59
VPS33AQ96AX1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VPS33AQ96AX1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
VPS33AQ96AX1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS33AQ96AX1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS33AQ96AX1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.71■□□□□ 0.59
VPS33AQ96AX1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS33AQ96AX1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS33AQ96AX1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.71■□□□□ 0.59
VPS33AQ96AX1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS33AQ96AX1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS33AQ96AX1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VPS33AQ96AX1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS33AQ96AX1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
VPS33AQ96AX1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 C2orf69P4-201ENST00000565394 541 ntBASIC18.7■□□□□ 0.58
VPS33AQ96AX1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.7■□□□□ 0.58
VPS33AQ96AX1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 AC016769.1-201ENST00000409132 1010 ntBASIC18.69■□□□□ 0.58
VPS33AQ96AX1 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.69■□□□□ 0.58
VPS33AQ96AX1 AC023632.3-201ENST00000521633 145 ntBASIC18.69■□□□□ 0.58
VPS33AQ96AX1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 AC069236.1-201ENST00000604339 616 ntBASIC18.69■□□□□ 0.58
VPS33AQ96AX1 AC020763.4-201ENST00000623414 4170 ntBASIC18.69■□□□□ 0.58
VPS33AQ96AX1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS33AQ96AX1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms